| Protein: | ASG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 964 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASG1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..964] | [1..964] |
|
|
0.0 | [10..756] | [28..715] |
|
|
0.0 | [10..756] | [28..715] |
|
|
0.0 | [1..725] | [29..712] |
|
|
0.0 | [11..631] | [14..567] |
|
|
7.0E-98 | [12..744] | [7..689] |
|
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2.0E-97 | [13..729] | [62..743] |
|
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1.0E-96 | [1..744] | [1..702] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MPEQAQQGEQ SVKRRRVTRA CDECRKKKVK CDGQQPCIHC TVYSYECTYK KPTKRTQNSG 60
61 NSGVLTLGNV TTGPSSSTVV AAAASNPNKL LSNIK
|
| Detection Method: |  |
| Confidence: | 44.68867 |
| Match: | 1d66A_ |
| Description: | Gal4; CD2-Gal4 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.226078362275538 | bayes_pls_golite062009 |
|
Region A: Residues: [96-192] |
1 11 21 31 41 51
| | | | | |
1 TERAILPGAS TIPASNNPSK PRKYKTKSTR LQSKIDRYKQ IFDEVFPQLP DIDNLDIPVF 60
61 LQIFHNFKRD SQSFLDDTVK EYTLIVNDSS SPIQPVL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.863 | 0.001 | nucleus | a.60.9 | lambda integrase-like, N-terminal domain |
|
Region A: Residues: [193-435] |
1 11 21 31 41 51
| | | | | |
1 SSNSKNSTPD EFLPNMKSDS NSASSNREQD SVDTYSNIPV GREIKIILPP KAIALQFVKS 60
61 TWEHCCVLLR FYHRPSFIRQ LDELYETDPN NYTSKQMQFL PLCYAAIAVG ALFSKSIVSN 120
121 DSSREKFLQD EGYKYFIAAR KLIDITNARD LNSIQAILML IIFLQCSARL STCYTYIGVA 180
181 MRSALRAGFH RKLSPNSGFS PIEIEMRKRL FYTIYKLDVY INAMLGLPRS ISPDDFDQTL 240
241 PLD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.861 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
|
Region A: Residues: [436-782] |
1 11 21 31 41 51
| | | | | |
1 LSDENITEVA YLPENQHSVL SSTGISNEHT KLFLILNEII SELYPIKKTS NIISHETVTS 60
61 LELKLRNWLD SLPKELIPNA ENIDPEYERA NRLLHLSFLH VQIILYRPFI HYLSRNMNAE 120
121 NVDPLCYRRA RNSIAVARTV IKLAKEMVSN NLLTGSYWYA CYTIFYSVAG LLFYIHEAQL 180
181 PDKDSAREYY DILKDAETGR SVLIQLKDSS MAASRTYNLL NQIFEKLNSK TIQLTALHSS 240
241 PSNESAFLVT NNSSALKPHL GDSLQPPVFF SSQDTKNSFS LAKSEESTND YAMANYLNNT 300
301 PISENPLNEA QQQDQVSQGT TNMSNERDPN NFLSIDIRLD NNGQSNI
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [783-964] |
1 11 21 31 41 51
| | | | | |
1 LDATDDVFIR NDGDIPTNSA FDFSSSKSNA SNNSNPDTIN NNYNNVSGKN NNNNNITNNS 60
61 NNNHNNNNND NNNNNNNNNN NNNNNNNSGN SSNNNNNNNN NKNNNDFGIK IDNNSPSYEG 120
121 FPQLQIPLSQ DNLNIEDKEE MSPNIEIKNE QNMTDSNDIL GVFDQLDAQL FGKYLPLNYP 180
181 SE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [697-964] |
1 11 21 31 41 51
| | | | | |
1 DSLQPPVFFS SQDTKNSFSL AKSEESTNDY AMANYLNNTP ISENPLNEAQ QQDQVSQGTT 60
61 NMSNERDPNN FLSIDIRLDN NGQSNILDAT DDVFIRNDGD IPTNSAFDFS SSKSNASNNS 120
121 NPDTINNNYN NVSGKNNNNN NITNNSNNNH NNNNNDNNNN NNNNNNNNNN NNNSGNSSNN 180
181 NNNNNNNKNN NDFGIKIDNN SPSYEGFPQL QIPLSQDNLN IEDKEEMSPN IEIKNEQNMT 240
241 DSNDILGVFD QLDAQLFGKY LPLNYPSE
|
| Detection Method: | |
| Confidence: | 2.17 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
