| Protein: | KGD1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1014 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KGD1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [6..1011] | [58..1077] |
|
|
0.0 | [1..1014] | [1..1014] |
|
|
0.0 | [31..1011] | [1..930] |
|
|
0.0 | [38..1011] | [34..1012] |
|
|
0.0 | [31..1011] | [1..930] |
|
|
0.0 | [3..1012] | [17..1016] |
|
|
0.0 | [1..1011] | [1..1008] |
|
|
0.0 | [21..1011] | [13..1014] |
|
|
0.0 | [31..1011] | [1..930] |
|
|
0.0 | [2..1011] | [4..1014] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MLRFVSSQTC RYSSRGLLKT SLLKNASTVK IVGRGLATTG TDNFLSTSNA TYIDEMYQAW 60
61 QKDPSSVHVS WDAYFKNMSN PKIPATKAFQ APPSISNFPQ GTEAAPLGTA MTGSVDENVS 120
121 IHLKVQLLCR AYQVRGHLKA HIDPLGIS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [149-275] |
1 11 21 31 41 51
| | | | | |
1 FGSNKNNPVP PELTLDYYGF SKHDLDKEIN LGPGILPRFA RDGKSKMSLK EIVDHLEKLY 60
61 CSSYGVQYTH IPSKQKCDWL RERIEIPEPY QYTVDQKRQI LDRLTWATSF ESFLSTKFPN 120
121 DKRFGLE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [276-379] |
1 11 21 31 41 51
| | | | | |
1 GLESVVPGIK TLVDRSVELG VEDIVLGMAH RGRLNVLSNV VRKPNESIFS EFKGSSARDD 60
61 IEGSGDVKYH LGMNYQRPTT SGKYVNLSLV ANPSHLESQD PVVL
|
|
Region B: Residues: [397-559] |
1 11 21 31 41 51
| | | | | |
1 KALGVLLHGD AAFAGQGVVY ETMGFLTLPE YSTGGTIHVI TNNQIGFTTD PRFARSTPYP 60
61 SDLAKAIDAP IFHVNANDVE AVTFIFNLAA EWRHKFHTDA IIDVVGWRKH GHNETDQPSF 120
121 TQPLMYKKIA KQKSVIDVYT EKLISEGTFS KKDIDEHKKW VWN
|
| Detection Method: | |
| Confidence: | 70.154902 |
| Match: | 1gpuA_ |
| Description: | Transketolase (TK), Pyr module; Transketolase (TK), PP module; Transketolase (TK), C-domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [380-396] |
1 11 21 31 41 51
| | | | | |
1 GRTRALLHAK NDLKEKT
|
|
Region B: Residues: [560-598] |
1 11 21 31 41 51
| | | | | |
1 LFEDAFEKAK DYVPSQREWL TAAWEGFKSP KELATEILP
|
| Detection Method: | |
| Confidence: | 70.154902 |
| Match: | 1gpuA_ |
| Description: | Transketolase (TK), Pyr module; Transketolase (TK), PP module; Transketolase (TK), C-domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [599-702] |
1 11 21 31 41 51
| | | | | |
1 HEPTNVPEST LKELGKVLSS WPEGFEVHKN LKRILKNRGK SIETGEGIDW ATGEALAFGT 60
61 LVLDGQNVRV SGEDVERGTF SQRHAVLHDQ QSEAIYTPLS TLNN
|
| Detection Method: | |
| Confidence: | 70.154902 |
| Match: | 1gpuA_ |
| Description: | Transketolase (TK), Pyr module; Transketolase (TK), PP module; Transketolase (TK), C-domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [703-881] |
1 11 21 31 41 51
| | | | | |
1 EKADFTIANS SLSEYGVMGF EYGYSLTSPD YLVMWEAQFG DFANTAQVII DQFIAGGEQK 60
61 WKQRSGLVLS LPHGYDGQGP EHSSGRLERF LQLANEDPRY FPSEEKLQRQ HQDCNFQVVY 120
121 PTTPANLFHI LRRQQHRQFR KPLALFFSKQ LLRHPLARSS LSEFTEGGFQ WIIEDIEHG
|
| Detection Method: | |
| Confidence: | 75.0 |
| Match: | 1ik6A_ |
| Description: | E1-beta subunit of pyruvate dehydrogenase, Pyr module; E1-beta subunit of pyruvate dehydrogenase, C-domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [882-1014] |
1 11 21 31 41 51
| | | | | |
1 KSIGTKEETK RLVLLSGQVY TALHKRRESL GDKTTAFLKI EQLHPFPFAQ LRDSLNSYPN 60
61 LEEIVWCQEE PLNMGSWAYT EPRLHTTLKE TDKYKDFKVR YCGRNPSGAV AAGSKSLHLA 120
121 EEDAFLKDVF QQS
|
| Detection Method: | |
| Confidence: | 75.0 |
| Match: | 1ik6A_ |
| Description: | E1-beta subunit of pyruvate dehydrogenase, Pyr module; E1-beta subunit of pyruvate dehydrogenase, C-domain |
| Matching Structure (courtesy of the PDB): |
|
