| Protein: | SNL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 159 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SNL1.
| Description | E-value | Query Range |
Subject Range |
|
|
8.0E-75 | [1..159] | [1..159] |
|
Region A: Residues: [1-66] |
1 11 21 31 41 51
| | | | | |
1 MSHNAMEHWK SKLSKTSTST YVLLAVIAVV FLVTIRRPNG SKGKSSKKRA SKKNKKGKNQ 60
61 FEKAPV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.418 | a.22.1 | Histone-fold |
| View | Download | 0.392 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.375 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.499 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.746 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.671 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.566 | a.112.1 | Description not found. |
| View | Download | 0.540 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.534 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.528 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.386 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.384 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.383 | a.21.1 | HMG-box |
| View | Download | 0.382 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.381 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.373 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.370 | a.101.1 | Uteroglobin-like |
| View | Download | 0.364 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.364 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.354 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.346 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.343 | a.112.1 | Description not found. |
| View | Download | 0.339 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.336 | a.17.1 | p8-MTCP1 |
| View | Download | 0.334 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.326 | a.17.1 | p8-MTCP1 |
| View | Download | 0.324 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.300 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.300 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.296 | a.22.1 | Histone-fold |
| View | Download | 0.296 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.294 | a.7.7 | BAG domain |
| View | Download | 0.292 | a.21.1 | HMG-box |
| View | Download | 0.276 | a.112.1 | Description not found. |
| View | Download | 0.275 | a.101.1 | Uteroglobin-like |
| View | Download | 0.270 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.269 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.264 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.257 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.254 | a.112.1 | Description not found. |
| View | Download | 0.251 | a.5.7 | 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain |
| View | Download | 0.251 | a.55.1 | IHF-like DNA-binding proteins |
| View | Download | 0.250 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.247 | a.112.1 | Description not found. |
| View | Download | 0.241 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.238 | a.112.1 | Description not found. |
| View | Download | 0.238 | a.58.1 | Chemotaxis receptor methyltransferase CheR, N-terminal domain |
| View | Download | 0.233 | a.21.1 | HMG-box |
| View | Download | 0.231 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.230 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.230 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.230 | a.64.1 | Saposin |
| View | Download | 0.230 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.229 | a.21.1 | HMG-box |
| View | Download | 0.229 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.228 | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.226 | a.5.1 | DNA helicase RuvA subunit, C-terminal domain |
| View | Download | 0.212 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.209 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.206 | f.34.1 | Mechanosensitive channel protein MscS (YggB), transmembrane region |
| View | Download | 0.205 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.205 | a.47.2 | t-snare proteins |
| View | Download | 0.205 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| Term | Confidence | Notes |
| binding | 2.26936539964415 | bayes_pls_golite062009 |
| protein binding | 1.44233807327602 | bayes_pls_golite062009 |
|
Region A: Residues: [67-159] |
1 11 21 31 41 51
| | | | | |
1 PLTLEEQIDN VSLRYGNELE GRSKDLINRF DVEDEKDIYE RNYCNEMLLK LLIELDSIDL 60
61 INVDESLRRP LKEKRKGVIK EIQAMLKSLD SLK
|
| Detection Method: | |
| Confidence: | 29.481486 |
| Match: | PF02179 |
| Description: | BAG domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
