| Protein: | AIM18 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 321 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM18.
| Description | E-value | Query Range |
Subject Range |
|
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0.0 | [1..321] | [1..321] |
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|
0.0 | [9..321] | [1..313] |
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1.0E-76 | [96..318] | [155..376] |
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2.0E-67 | [117..313] | [69..245] |
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0.008 | [83..320] | [57..275] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MDRGRCANML KSLQRTLAKC QKSPSTNHWQ CFKRNFTSIR ATKYPGRSNS TFHYWPWFAA 60
61 STLLATSLYY RDRPVQNDDK TDAFPS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.605 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.596 | a.47.2 | t-snare proteins |
| View | Download | 0.770 | a.7.7 | BAG domain |
| View | Download | 0.734 | a.24.4 | Hemerythrin |
| View | Download | 0.643 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.770 | a.7.7 | BAG domain |
| View | Download | 0.734 | a.24.4 | Hemerythrin |
| View | Download | 0.643 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.605 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.596 | a.47.2 | t-snare proteins |
| View | Download | 0.581 | a.64.1 | Saposin |
| View | Download | 0.539 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.528 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.483 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.468 | a.64.1 | Saposin |
| View | Download | 0.451 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.422 | a.64.1 | Saposin |
| View | Download | 0.418 | a.7.7 | BAG domain |
| View | Download | 0.413 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.409 | a.7.7 | BAG domain |
| View | Download | 0.365 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.362 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.355 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.349 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.345 | d.58.16 | Poly(A) polymerase, C-terminal domain |
| View | Download | 0.341 | a.8.3 | Families 57/38 glycoside transferase middle domain |
| View | Download | 0.340 | a.77.1 | DEATH domain |
| View | Download | 0.337 | a.24.4 | Hemerythrin |
| View | Download | 0.336 | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.334 | d.131.1 | DNA clamp |
| View | Download | 0.329 | a.2.3 | Chaperone J-domain |
| View | Download | 0.325 | a.118.8 | TPR-like |
| View | Download | 0.320 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.320 | a.39.1 | EF-hand |
| View | Download | 0.311 | a.64.1 | Saposin |
| View | Download | 0.310 | a.47.2 | t-snare proteins |
| View | Download | 0.307 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.303 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.303 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.301 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.301 | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.290 | a.118.8 | TPR-like |
| View | Download | 0.289 | a.40.1 | Calponin-homology domain, CH-domain |
| View | Download | 0.285 | a.39.1 | EF-hand |
| View | Download | 0.274 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.273 | a.4.1 | Homeodomain-like |
| View | Download | 0.266 | a.2.1 | GreA transcript cleavage protein, N-terminal domain |
| View | Download | 0.264 | a.17.1 | p8-MTCP1 |
| View | Download | 0.262 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.258 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.257 | a.41.1 | Domain of poly(ADP-ribose) polymerase |
| View | Download | 0.254 | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
| View | Download | 0.254 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.250 | a.4.1 | Homeodomain-like |
| View | Download | 0.244 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.244 | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.238 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.233 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.232 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.231 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.228 | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.226 | a.4.1 | Homeodomain-like |
| View | Download | 0.222 | d.102.1 | Regulatory factor Nef |
| View | Download | 0.222 | d.141.1 | Ribosomal protein L6 |
| View | Download | 0.221 | f.16.1 | Gated mechanosensitive channel |
| View | Download | 0.221 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.219 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.218 | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.218 | d.82.2 | Frataxin-like |
| View | Download | 0.217 | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.216 | a.39.1 | EF-hand |
| View | Download | 0.214 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.214 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.213 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.213 | d.150.1 | 4'-phosphopantetheinyl transferase |
| View | Download | 0.212 | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.212 | a.60.8 | HRDC-like |
| View | Download | 0.209 | a.30.1 | ROP protein |
| View | Download | 0.206 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.205 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.205 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.205 | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.202 | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.202 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
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Region A: Residues: [87-321] |
1 11 21 31 41 51
| | | | | |
1 HTESIQVDSS VSDFPLTITA LNFPVSTTFK LLGYGQRHVT FLRFKVYALG LYLAENDENL 60
61 VSDTLNETYL HKYFLDVDDS KTPKENLARL LKRDDSKSVM MIDDLLDSGM RMLAKITPVR 120
121 NTDFKHLKEG LVKTISKHPD VANNKDTLAK GLSELNDAFS RKGSVRKNDD LIIELLANGA 180
181 LQFSYHDSKN NEFEVMGVVN NQLVGKFLFS QYLCGEKSPS PQAKKTAIDK LITLL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
