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View Structure Prediction Details

Protein: AIM18
Organism: Saccharomyces cerevisiae
Length: 321 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM18.

Description E-value Query
Range
Subject
Range
AIM18_YEAS1 - Altered inheritance of mitochondria protein 18, mitochondrial OS=Saccharomyces cerevisiae (strain RM...
AIM18_YEAST - Altered inheritance of mitochondria protein 18, mitochondrial OS=Saccharomyces cerevisiae (strain AT...
AIM18_YEAS8 - Altered inheritance of mitochondria protein 18, mitochondrial OS=Saccharomyces cerevisiae (strain La...
AIM18 - Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purifi...
0.0 [1..321] [1..321]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [9..321] [1..313]
gi|164426110, gi... - gi|164426110|ref|XP_961584.2| hypothetical protein NCU01218 [Neurospora crassa OR74A], gi|157071202|...
gi|16415981 - gi|16415981|emb|CAB88565.2| conserved hypothetical protein [Neurospora crassa]
1.0E-76 [96..318] [155..376]
SPAC18G6.01c - conserved fungal protein
YAQ1_SCHPO - Uncharacterized protein C18G6.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC18G6...
2.0E-67 [117..313] [69..245]
FAP1_ARATH - Fatty-acid-binding protein 1 OS=Arabidopsis thaliana GN=FAP1 PE=1 SV=1
0.008 [83..320] [57..275]

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Predicted Domain #1
Region A:
Residues: [1-86]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRGRCANML KSLQRTLAKC QKSPSTNHWQ CFKRNFTSIR ATKYPGRSNS TFHYWPWFAA  60
   61 STLLATSLYY RDRPVQNDDK TDAFPS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [87-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HTESIQVDSS VSDFPLTITA LNFPVSTTFK LLGYGQRHVT FLRFKVYALG LYLAENDENL  60
   61 VSDTLNETYL HKYFLDVDDS KTPKENLARL LKRDDSKSVM MIDDLLDSGM RMLAKITPVR 120
  121 NTDFKHLKEG LVKTISKHPD VANNKDTLAK GLSELNDAFS RKGSVRKNDD LIIELLANGA 180
  181 LQFSYHDSKN NEFEVMGVVN NQLVGKFLFS QYLCGEKSPS PQAKKTAIDK LITLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle