| Protein: | SPC97 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 823 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPC97.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..823] | [1..823] |
|
|
0.0 | [4..823] | [159..896] |
|
|
0.0 | [4..823] | [159..899] |
|
|
0.0 | [55..771] | [67..782] |
|
|
0.0 | [51..793] | [193..806] |
|
|
0.0 | [19..792] | [216..972] |
|
|
0.0 | [46..787] | [176..804] |
|
|
0.0 | [51..799] | [241..892] |
|
Region A: Residues: [1-53] |
1 11 21 31 41 51
| | | | | |
1 MEIKEVDDRA ELLRYTNNIP LLGKLVNHQP LWSTNPKLKS FSLEKISAPD QRR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [54-430] |
1 11 21 31 41 51
| | | | | |
1 VQEALVVKDL LNVLIGLEGT YIRYFNDYEP SDPETPIEFK IAKKMDPSFK TFSRRIVRYG 60
61 KQYMILTRAY EKWSDTSFGM VLQRFAYEIR RFLEDVYLKT LVERLERDFN KVPNFSIREL 120
121 EQIINETEVN KQMELLYNIY EEIFREIEER RTNQSSQEDF NNFMDSMKNE SSLHLRLMVA 180
181 FDTTVYPVPK GGAILKIFQQ KILENLGDRS SVMFLKKLLN NISQDYCTML YEWLTQGILN 240
241 DPYQEFMTYD DLEGKTDNIF DTRDRAWDTQ YFIRKDVLLR DCDSEEDKNL LFKMLRTGIL 300
301 LKVVRASLQI PTIPSNSSDI TIQEINDFAD LMEGSNLELY VDKCYSRANE IFLKLFFQGY 360
361 DLINVLKHLQ QIFLGYQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [431-544] |
1 11 21 31 41 51
| | | | | |
1 SGHNVLKFLT KNMGELTKHY RNDNNANYDK LLQNFELERQ SENPNNLMRQ LLMIQFDTET 60
61 LPQVLSHYLQ IYPEVPENNS ANDDSDPLMH ANNFKNMNAI LFDELSKERT GAYH
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [545-823] |
1 11 21 31 41 51
| | | | | |
1 GSNLELYTPK SAIYHLKFDI NIPYPLNIII SRTCMIKYQI ILRYQLVLQY HSRLLDETWM 60
61 DLNKTPSWKY RGYSHTVKRR IVRATRVLHA KMNHFIKTIM EYFNQNVIDK EVYSLEKCYR 120
121 NPTLAVAIQN ELEGGLTNIM TNRCLSDLIP LQLQIFDIVY KFCKFIKSMR AKLCQLDPVL 180
181 YEKHKSGMMK TLNEGYRTNN GGQEDVGYQE DAALELIQKL IEYISNASSI FRKCLINFTQ 240
241 ELSTEKFDFY DSSSVDAAGI ERVLYSIVPP RSASASSQR
|
| Detection Method: | |
| Confidence: | 8.03 |
| Match: | 1ldjA |
| Description: | Anaphase promoting complex (APC); Cullin homolog 1, Cul-1; Cullin homolog 1, cul-1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [720-823] |
1 11 21 31 41 51
| | | | | |
1 LDPVLYEKHK SGMMKTLNEG YRTNNGGQED VGYQEDAALE LIQKLIEYIS NASSIFRKCL 60
61 INFTQELSTE KFDFYDSSSV DAAGIERVLY SIVPPRSASA SSQR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
