| Protein: | WSS1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 269 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WSS1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..269] | [1..269] |
|
|
4.0E-77 | [28..252] | [8..220] |
|
|
2.0E-74 | [28..245] | [65..274] |
|
|
9.0E-49 | [25..192] | [13..189] |
|
|
2.0E-43 | [6..152] | [82..239] |
|
|
6.0E-40 | [30..220] | [184..386] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MKTEGIKSPS AKYHDMAGSQ RIPHKNPHIQ KVAVLQSKPN KEDALNLIKE IAHKVSYLMK 60
61 ENHFKVTNLV EFYPRDQRLL GMNVNHGSKI MLRLRCSTDE FQFLPMECIM GTMLHELTHN 120
121 LFGPHDKKFY NKLDELIGRQ WVIEQRGLYD TFLGNGQRLG GRANLRSNRY PMTGISTNTG 180
181 IVRKRG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [187-269] |
1 11 21 31 41 51
| | | | | |
1 KGVKLGSLHP EGISSIDRGN SPRELAAFAA ERRYRDDRWC GETKNNKDQI ISDNISSSLE 60
61 VVILDDDDEV LPGDTLIEVI DLT
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.562 | a.39.1 | EF-hand |
| View | Download | 0.489 | a.21.1 | HMG-box |
| View | Download | 0.616 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.536 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.590 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.412 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.400 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.393 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.381 | a.64.1 | Saposin |
| View | Download | 0.377 | d.228.1 | Replication modulator SeqA, C-terminal DNA-binding domain |
| View | Download | 0.361 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.345 | a.54.1 | Domain of early E2A DNA-binding protein, ADDBP |
| View | Download | 0.330 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.324 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.310 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.310 | a.39.1 | EF-hand |
| View | Download | 0.303 | b.34.11 | GW domain |
| View | Download | 0.301 | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.300 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.300 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.294 | a.64.1 | Saposin |
| View | Download | 0.288 | a.17.1 | p8-MTCP1 |
| View | Download | 0.286 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.280 | a.64.1 | Saposin |
| View | Download | 0.275 | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.267 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.250 | d.26.1 | FKBP-like |
| View | Download | 0.248 | a.24.4 | Hemerythrin |
| View | Download | 0.244 | d.58.1 | 4Fe-4S ferredoxins |
| View | Download | 0.232 | d.169.1 | C-type lectin-like |
| View | Download | 0.230 | a.74.1 | Cyclin-like |
| View | Download | 0.226 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.223 | d.130.1 | S-adenosylmethionine synthetase |
| View | Download | 0.223 | a.39.1 | EF-hand |
| View | Download | 0.213 | d.44.1 | Fe,Mn superoxide dismutase (SOD), C-terminal domain |
