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View Structure Prediction Details

Protein: DAP2
Organism: Saccharomyces cerevisiae
Length: 818 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAP2.

Description E-value Query
Range
Subject
Range
DAP2_YEAST - Dipeptidyl aminopeptidase B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAP2 PE=1 SV...
DAP2 - Dipeptidyl aminopeptidase, synthesized as a glycosylated precursor; localizes to the vacuolar membra...
0.0 [1..818] [1..818]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
0.0 [6..815] [12..788]
gi|18765696 - ref|NP_001927.2| dipeptidylpeptidase VI isoform 2 [Homo sapiens]
gi|168275770 - gi|168275770|dbj|BAG10605.1| dipeptidyl aminopeptidase-like protein 6 [synthetic construct]
0.0 [6..815] [12..788]
gi|408716 - gi|408716|gb|AAC42062.1| dipeptidyl aminopeptidase-related protein
0.0 [6..815] [12..788]
gi|1092099 - gi|1092099|prf||2022316A neural membrane CD26 peptidase-like protein
gi|913778 - gi|913778|gb|AAB32954.1| BSPL=neural membrane CD26 peptidase-like protein [rats, brain, Peptide, 803...
0.0 [6..815] [12..788]

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Predicted Domain #1
Region A:
Residues: [1-257]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGGEEEVER IPDELFDTKK KHLLDKLIRV GIILVLLIWG TVLLLKSIPH HSNTPDYQEP  60
   61 NSNYTNDGKL KVSFSVVRNN TFQPKYHELQ WISDNKIESN DLGLYVTFMN DSYVVKSVYD 120
  121 DSYNSVLLEG KTFIHNGQNL TVESITASPD LKRLLIRTNS VQNWRHSTFG SYFVYDKSSS 180
  181 SFEEIGNEVA LAIWSPNSND IAYVQDNNIY IYSAISKKTI RAVTNDGSSF LFNGKPDWVY 240
  241 EEEVFEDDKA AWWSPTG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.09691
Match: 1erjA_
Description: Tup1, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.01438408843885 bayes_pls_golite062009
binding 0.549512873906854 bayes_pls_golite062009
heparin binding 0.437236652275566 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.282381128231187 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [258-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DYLAFLKIDE SEVGEFIIPY YVQDEKDIYP EMRSIKYPKS GTPNPHAELW VYSMKDGTSF  60
   61 HPRISGNKKD GSLLITEVTW VGNGNVLVKT TDRSSD

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [365-555]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTSNVVRNES SNGGWWEITH NTLFIPANET FDRPHNGYVD ILPIGGYNHL AYFENSNSSH  60
   61 YKTLTEGKWE VVNGPLAFDS MENRLYFIST RKSSTERHVY YIDLRSPNEI IEVTDTSEDG 120
  121 VYDVSFSSGR RFGLLTYKGP KVPYQKIVDF HSRKAEKCDK GNVLGKSLYH LEKNEVLTKI 180
  181 LEDYAVPRKS F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.0
Match: 1qfsA_
Description: Prolyl oligopeptidase, N-terminal domain; Prolyl oligopeptidase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [354-364]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ILTVFLIDTI A

[Run NCBI BLAST on this sequence.]

Region B:
Residues: [556-818]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RELNLGKDEF GKDILVNSYE ILPNDFDETL SDHYPVFFFA YGGPNSQQVV KTFSVGFNEV  60
   61 VASQLNAIVV VVDGRGTGFK GQDFRSLVRD RLGDYEARDQ ISAASLYGSL TFVDPQKISL 120
  121 FGWSYGGYLT LKTLEKDGGR HFKYGMSVAP VTDWRFYDSV YTERYMHTPQ ENFDGYVESS 180
  181 VHNVTALAQA NRFLLMHGTG DDNVHFQNSL KFLDLLDLNG VENYDVHVFP DSDHSIRYHN 240
  241 ANVIVFDKLL DWAKRAFDGQ FVK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 83.0
Match: 1qfsA_
Description: Prolyl oligopeptidase, N-terminal domain; Prolyl oligopeptidase, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle