YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: YHL026C
Organism: Saccharomyces cerevisiae
Length: 268 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHL026C.

Description E-value Query
Range
Subject
Range
YJD2_SCHPO - Uncharacterized protein C594.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC594.0...
SPCC594.02c - conserved fungal protein
7.0E-33 [138..209] [164..236]

Back

Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHSRVDLIT LWAFPHTISG DCALSLFIQV GLTWASEEIL VGFDDYKRPV FRLNKWITKP  60
   61 SPLKTESNEE IPPPKKRFIV DYFESKDNVV AKQNTLYHKH NWLFGYLEVN RGIIPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKEATLKGFL TSQFIHDSTQ SKFMNFIEWF VQKFIRSMIL AIAMFIVIWP VTMGILAGIG  60
   61 HKVGSHDYYF NDYPLPQVMK LIYAVVIAFV CTPVAIIVIV LRNQFHEELY YEGLANGTLQ 120
  121 QDQEVCSTGN RSSGSTDQDI STTKQQSQEA VA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle