| Protein: | AIM17 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 465 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM17.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..465] | [1..465] |
|
|
0.0 | [19..457] | [14..401] |
|
|
0.0 | [19..457] | [30..417] |
|
|
4.0E-95 | [14..460] | [4..411] |
|
|
4.0E-94 | [29..463] | [8..385] |
|
|
1.0E-91 | [21..458] | [9..405] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MLRSNLCRGS RILARLTTTP RTYTSAATAA AANRGHIIKT YFNRDSTTIT FSMEESSKPV 60
61 SVCFNNVFLR DASHSAKLVT TGELYHNEKL TAPQDIQISE DGKSLVVKWK DGGHHQFPLQ 120
121 FFIDYK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.332 | 0.816 | mitochondrion | c.2.1 | NAD(P)-binding Rossmann-fold domains |
|
Region A: Residues: [127-282] |
1 11 21 31 41 51
| | | | | |
1 GSSFVSPATR KQESRYRPQL WNKRILKDNV KDLLSVSYNE FIDPKDDSKL FQTLVNLQKF 60
61 GIAFISGTPS SSSEGLTIQK ICERIGPIRS TVHGEGTFDV NASQATSVNA HYANKDLPLH 120
121 TDLPFLENVP GFQILQSLPA TEGEDPNTRP MNYFVD
|
|
Region B: Residues: [405-465] |
1 11 21 31 41 51
| | | | | |
1 FNNQFRLQLP ENCCVIFNNR RILHANSLTS SNQQWLKGCY FDSDTFKSKL KFLEEKFPHD 60
61 K
|
| Detection Method: | |
| Confidence: | 53.522879 |
| Match: | 1gy9A_ |
| Description: | Taurine/alpha-ketoglutarate dioxygenase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| damaged DNA binding | 2.1600632791412 | bayes_pls_golite062009 |
| oxidoreductase activity | 2.14660717798066 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.96457406152694 | bayes_pls_golite062009 |
| binding | 0.997838210709106 | bayes_pls_golite062009 |
| catalytic activity | 0.921320409505 | bayes_pls_golite062009 |
| nucleic acid binding | 0.195303464765705 | bayes_pls_golite062009 |
| DNA binding | 0.119653205743915 | bayes_pls_golite062009 |
| protein binding | 0.0481711987500598 | bayes_pls_golite062009 |
|
Region A: Residues: [283-404] |
1 11 21 31 41 51
| | | | | |
1 AFYATRNVRE SDFEAYEALQ IVPVNYIYEN GDKRYYQSKP LIEHHDINED NTLLGNYEAL 60
61 IKCINYSPPY QAPFTFGIYD KPSDLNNNLD LNLITTPAKL TERFLFKSFI RGLNLFESHI 120
121 ND
|
| Detection Method: | |
| Confidence: | 53.522879 |
| Match: | 1gy9A_ |
| Description: | Taurine/alpha-ketoglutarate dioxygenase |
| Matching Structure (courtesy of the PDB): |
|
