| Protein: | YIP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 248 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIP1.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-70 | [1..248] | [1..248] |
|
|
1.0E-62 | [5..247] | [26..254] |
|
|
2.0E-57 | [1..247] | [1..225] |
|
|
9.0E-50 | [7..247] | [18..257] |
|
|
7.0E-47 | [70..246] | [109..279] |
|
|
4.0E-44 | [19..241] | [6..237] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MSFYNTSNNA NNGGGFYQPS AQFAVPQGSM SFQNTVGSSN TGNDNNLGVA PDPLPVGILH 60
61 ALSTKGYPHE PPLLEEIGIN FDHIITKTKM VLIPIRFGSG VPQEILN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.422 | 0.787 | Golgi apparatus | a.118.8 | TPR-like |
| View | Download | 0.291 | 0.064 | membrane | a.138.1 | Multiheme cytochromes |
| View | Download | 0.526 | 0.020 | membrane | a.1.1 | Globin-like |
| View | Download | 0.451 | 0.007 | Golgi apparatus | a.74.1 | Cyclin-like |
| View | Download | 0.373 | 0.002 | Golgi apparatus | a.4.12 | TrpR-like |
| View | Download | 0.563 | 0.002 | Golgi apparatus | a.74.1 | Cyclin-like |
| View | Download | 0.364 | 0.001 | Golgi apparatus | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
| View | Download | 0.435 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.392 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.389 | N/A | N/A | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.329 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.307 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.275 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.247 | N/A | N/A | a.105.1 | FIS-like |
| View | Download | 0.238 | N/A | N/A | a.59.1 | PAH2 domain |
| View | Download | 0.236 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.227 | N/A | N/A | a.4.12 | TrpR-like |
| View | Download | 0.225 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.224 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.218 | N/A | N/A | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.216 | N/A | N/A | a.130.1 | Chorismate mutase II |
| View | Download | 0.215 | N/A | N/A | b.82.3 | cAMP-binding domain-like |
| View | Download | 0.210 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.209 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.201 | N/A | N/A | a.4.12 | TrpR-like |
|
Region A: Residues: [108-248] |
1 11 21 31 41 51
| | | | | |
1 DSDLAGPLIF FLLFGLFLLM AGKVHFGYIY GVALFGTISL HNLSKLMSNN DTSTQTNLQF 60
61 FNTASILGYC FLPLCFLSLL GIFHGLNNTT GYVVSVLFVI WSTWTSSGFL NSLLQLQNAR 120
121 LLIAYPLLIF YSVFALMVIF V
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.480 | 0.721 | vesicle-mediated transport | a.47.2 | t-snare proteins |
| View | Download | 0.614 | 0.059 | membrane | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.600 | 0.023 | Golgi apparatus | a.25.1 | Ferritin-like |
| View | Download | 0.795 | 0.019 | membrane | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.638 | 0.011 | membrane | a.24.3 | Cytochromes |
| View | Download | 0.520 | 0.000 | Golgi apparatus | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.559 | 0.000 | Golgi apparatus | a.18.1 | T4 endonuclease V |
| View | Download | 0.726 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.688 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.551 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.518 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.509 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.504 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.498 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.480 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.480 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.477 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.476 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.459 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.456 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.453 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.452 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.441 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.441 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.436 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.427 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.424 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.411 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.407 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.403 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.399 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.395 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.394 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.383 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.375 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.375 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.370 | N/A | N/A | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.370 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.368 | N/A | N/A | a.7.4 | Smac/diablo |
| View | Download | 0.364 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.361 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.361 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.357 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.356 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.355 | N/A | N/A | f.31.1 | Photosystem I reaction center subunit XI, PsaL |
| View | Download | 0.355 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.348 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.346 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.346 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.342 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.341 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.340 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.338 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.337 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.333 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.332 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.326 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.326 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.321 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.320 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.320 | N/A | N/A | a.182.1 | GatB/YqeY domain |
| View | Download | 0.312 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.310 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.310 | N/A | N/A | a.47.1 | STAT |
| View | Download | 0.297 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.297 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.295 | N/A | N/A | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.295 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.294 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.291 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.291 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.285 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.282 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.282 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.281 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.279 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.277 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.277 | N/A | N/A | c.55.3 | Ribonuclease H-like |
| View | Download | 0.276 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.273 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.270 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.270 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.268 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.265 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.265 | N/A | N/A | d.111.1 | PR-1-like |
| View | Download | 0.264 | N/A | N/A | a.185.1 | Gametocyte protein Pfg27 |
| View | Download | 0.263 | N/A | N/A | b.88.1 | Mss4-like |
| View | Download | 0.262 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.261 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.259 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.257 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.254 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.254 | N/A | N/A | a.90.1 | Transcription factor STAT-4 N-domain |
| View | Download | 0.252 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.251 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.251 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.249 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.248 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.247 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.246 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.245 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.244 | N/A | N/A | a.7.8 | GAT domain |
| View | Download | 0.244 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.243 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.242 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.241 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.241 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.240 | N/A | N/A | c.55.1 | Actin-like ATPase domain |
| View | Download | 0.238 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.237 | N/A | N/A | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.236 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.236 | N/A | N/A | a.96.1 | DNA-glycosylase |
| View | Download | 0.235 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.233 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.233 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.233 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.233 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.232 | N/A | N/A | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.232 | N/A | N/A | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.231 | N/A | N/A | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
| View | Download | 0.230 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.229 | N/A | N/A | i.1.1 | Ribosome and ribosomal fragments |
| View | Download | 0.229 | N/A | N/A | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
| View | Download | 0.227 | N/A | N/A | a.71.2 | Helical domain of Sec23/24 |
| View | Download | 0.227 | N/A | N/A | a.73.1 | Retrovirus capsid protein, N-terminal core domain |
| View | Download | 0.227 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
| View | Download | 0.225 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.225 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.224 | N/A | N/A | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.224 | N/A | N/A | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.224 | N/A | N/A | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.223 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.222 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.222 | N/A | N/A | d.6.1 | Prion-like |
| View | Download | 0.221 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.219 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.219 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.218 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.218 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.215 | N/A | N/A | c.115.1 | Hypothetical protein MTH777 (MT0777) |
| View | Download | 0.214 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.214 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.213 | N/A | N/A | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.213 | N/A | N/A | a.48.1 | N-terminal domain of cbl (N-cbl) |
| View | Download | 0.213 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.212 | N/A | N/A | a.25.2 | Thermoplasma ferritin-like 4-helical bundle |
| View | Download | 0.212 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.212 | N/A | N/A | a.48.2 | Transferrin receptor ectodomain, C-terminal domain |
| View | Download | 0.212 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.211 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.210 | N/A | N/A | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.210 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.210 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.209 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.208 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.208 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.207 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.206 | N/A | N/A | a.167.1 | Porin chaperone SurA, peptide-binding domain |
| View | Download | 0.205 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.203 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.203 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.203 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.201 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.200 | N/A | N/A | a.25.1 | Ferritin-like |
