| Protein: | ART5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 586 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ART5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..586] | [1..586] |
|
|
7.0E-89 | [143..582] | [21..463] |
|
|
2.0E-71 | [156..581] | [30..399] |
|
|
2.0E-70 | [157..549] | [38..402] |
|
Region A: Residues: [1-126] |
1 11 21 31 41 51
| | | | | |
1 MFSLSSLSSS GGHSEQKERE RISYFDIRIN SPYKDIILIQ GSPLELSSIP LSGNLVISVK 60
61 NEIVVKKISL RLVGRFKLEF LQVGRYKKNS SSLASLVKEK RKIFECYWDN LLVSSKGDVL 120
121 VGGENA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.356 | N/A | N/A | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
|
Region A: Residues: [127-201] |
1 11 21 31 41 51
| | | | | |
1 ENQHNSSSGR STSNQDMDTS GNAIFLSKRS LSSPVFNKII RRKTHSSHRK ILELPENGVT 60
61 GTPFEGLREN ARSRS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.785 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.785 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.736 | a.60.2 | RuvA domain 2-like |
| View | Download | 0.694 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.694 | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.609 | d.120.1 | Cytochrome b5 |
| View | Download | 0.609 | d.120.1 | Cytochrome b5 |
| View | Download | 0.595 | a.39.1 | EF-hand |
| View | Download | 0.595 | a.39.1 | EF-hand |
| View | Download | 0.586 | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.494 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.486 | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.470 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.445 | d.15.1 | Ubiquitin-like |
| View | Download | 0.440 | a.156.1 | S13-like H2TH domain |
| View | Download | 0.393 | d.120.1 | Cytochrome b5 |
| View | Download | 0.390 | a.77.1 | DEATH domain |
| View | Download | 0.385 | a.77.1 | DEATH domain |
| View | Download | 0.366 | a.39.1 | EF-hand |
| View | Download | 0.355 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.350 | a.64.1 | Saposin |
| View | Download | 0.339 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.333 | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.330 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.321 | a.64.2 | Bacteriocin AS-48 |
| View | Download | 0.310 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.295 | d.15.1 | Ubiquitin-like |
| View | Download | 0.294 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.288 | a.4.13 | Sigma3 and sigma4 domains of RNA polymerase sigma factors |
| View | Download | 0.278 | a.5.2 | UBA-like |
| View | Download | 0.278 | b.36.1 | PDZ domain-like |
| View | Download | 0.271 | a.77.1 | DEATH domain |
| View | Download | 0.265 | a.4.1 | Homeodomain-like |
| View | Download | 0.255 | a.77.1 | DEATH domain |
| View | Download | 0.253 | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.231 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.226 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.221 | a.77.1 | DEATH domain |
| View | Download | 0.220 | a.39.1 | EF-hand |
| View | Download | 0.214 | a.156.1 | S13-like H2TH domain |
|
Region A: Residues: [202-273] |
1 11 21 31 41 51
| | | | | |
1 SSSNTLNNNS HSYSNRDGSG SSYLFLMKRG NYELPFNTML PPEVCETIEG LQSGSILYSF 60
61 EAIIDGRQLW DT
|
|
Region B: Residues: [377-394] |
1 11 21 31 41 51
| | | | | |
1 QYYAMKDSSA QIYDDEIA
|
|
Region C: Residues: [409-440] |
1 11 21 31 41 51
| | | | | |
1 DKLDVDCPFT IPDNLKQITQ DCCLQDNLIR VM
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1jsyA_ |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.27724584326272 | bayes_pls_golite062009 |
| protein binding | 1.04724707449453 | bayes_pls_golite062009 |
|
Region A: Residues: [274-376] |
1 11 21 31 41 51
| | | | | |
1 DLSVHTSPHG PIGSTSTSGN GMRTKNKIII KKFKYLRILR TLSMDNLAMQ EEISVGNTWR 60
61 DKLQYETSIP SRAVPIGSTT PVKIKIFPFE KNIRLDRIEM ALI
|
|
Region B: Residues: [395-408] |
1 11 21 31 41 51
| | | | | |
1 VMKITHLADF GPLT
|
|
Region C: Residues: [441-455] |
1 11 21 31 41 51
| | | | | |
1 HKLQVRILLQ RQVDG
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1jsyA_ |
| Description: | Arrestin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [456-586] |
1 11 21 31 41 51
| | | | | |
1 EYKNLEIKAQ LPMLLFISPH LPMKGRLVLF DKHDGKIHFR PGELVPLFLT TYPAQGLTPG 60
61 VELNSTTTAH LALPQPPPNY HESTNDHLMP ALQPLGADSV VLTVPSYEQA QAQASASSYV 120
121 TGSVPAYCDD D
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
