| Protein: | SPT16 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 1035 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPT16.
| Description | E-value | Query Range |
Subject Range |
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0.0 | [1..1035] | [1..1035] |
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0.0 | [4..1028] | [3..1001] |
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0.0 | [4..1028] | [3..1001] |
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0.0 | [1..1035] | [1..1033] |
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0.0 | [4..1035] | [3..1010] |
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0.0 | [1..1035] | [1..1011] |
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0.0 | [40..975] | [7..910] |
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0.0 | [1..1033] | [1..1051] |
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0.0 | [4..1034] | [24..1032] |
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Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MEELNIDFDV FKKRIELLYS KYNEFEGSPN SLLFVLGSSN AENPYQKTTI LHNWLLSYEF 60
61 PATLIALVPG KVIIITSSAK AKHLQKAIDL FKDPESKITL ELWQRNNKEP ELNKKLFDDV 120
121 IALINSAGKT VGIPEKDSYQ GKFMTEWNPV WEAAVKENEF NVIDISLGLS K
|
| Detection Method: |  |
| Confidence: | 80.045757 |
| Match: | 1az9__ |
| Description: | Aminopeptidase P; Aminopeptidase P, C-terminal domain |
| Term | Confidence | Notes |
| transcription regulator activity | 2.3228898238998 | bayes_pls_golite062009 |
| DNA binding | 1.6830709273154 | bayes_pls_golite062009 |
| nucleic acid binding | 1.67660713848062 | bayes_pls_golite062009 |
| binding | 1.4562583231987 | bayes_pls_golite062009 |
| transcription factor activity | 1.02226978078776 | bayes_pls_golite062009 |
| protein binding | 0.170797254754318 | bayes_pls_golite062009 |
| catalytic activity | 0.148551873544128 | bayes_pls_golite062009 |
|
Region A: Residues: [172-468] |
1 11 21 31 41 51
| | | | | |
1 VWEVKDVNEQ AFLSVSSKGS DKFMDLLSNE MVRAVDEELK ITNAKLSDKI ENKIDDVKFL 60
61 KQLSPDLSAL CPPNYKFNFD LLDWTYSPII QSGKKFDLRV SARSTNDQLY GNGCILASCG 120
121 IRYNNYCSNI TRTFLIDPSE EMANNYDFLL TLQKEIVTNI LKPGRTPKEV YESVIEYIEK 180
181 TKPELVPNFT KNIGSLIGLE FRDSNFILNV KNDYRKIQRG DCFNISFGFN NLKDSQSANN 240
241 YALQLADTVQ IPLDETEPPR FLTNYTKAKS QISFYFNNEE EDNNKKKSSP ATKVPSK
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| Detection Method: | |
| Confidence: | 80.045757 |
| Match: | 1az9__ |
| Description: | Aminopeptidase P; Aminopeptidase P, C-terminal domain |
|
Region A: Residues: [469-523] |
1 11 21 31 41 51
| | | | | |
1 PDRNSKILRT KLRGEARGGA EDAQKEQIRK ENQKKLHEKL EKNGLLRFSA ADANG
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.651 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.589 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.554 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.477 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.445 | a.4.1 | Homeodomain-like |
| View | Download | 0.420 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.418 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.417 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.405 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.405 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.369 | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.367 | a.23.5 | Hemolysin expression modulating protein HHA |
| View | Download | 0.350 | a.30.1 | ROP protein |
| View | Download | 0.322 | a.140.1 | LEM domain |
| View | Download | 0.317 | a.112.1 | Description not found. |
| View | Download | 0.308 | a.2.7 | tRNA-binding arm |
| View | Download | 0.289 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.282 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.264 | a.22.1 | Histone-fold |
| View | Download | 0.258 | a.161.1 | beta-catenin-interacting protein ICAT |
| View | Download | 0.253 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.236 | f.13.1 | Family A G protein-coupled receptor-like |
| View | Download | 0.234 | a.2.8 | Eukaryotic DNA topoisomerase I, dispensable insert domain |
| View | Download | 0.234 | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.221 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.216 | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.216 | a.2.7 | tRNA-binding arm |
| View | Download | 0.211 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.209 | a.2.2 | Ribosomal protein L29 (L29p) |
| View | Download | 0.209 | a.30.1 | ROP protein |
| View | Download | 0.205 | a.4.1 | Homeodomain-like |
| View | Download | 0.202 | a.2.7 | tRNA-binding arm |
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Region A: Residues: [524-773] |
1 11 21 31 41 51
| | | | | |
1 PDSEPRQYFK KYESYVRDSQ LPTNIRDLRI HVDWKSQTII LPIYGRPVPF HINSYKNGSK 60
61 NEEGEYTYLR LNFNSPGSSG GISKKVEELP YEESADNQFV RSITLRSKDG DRMSETFKQI 120
121 ADLKKEATKR EQERKALADV VQQDKLIENK TGRTKRLDQI FVRPNPDTKR VPSTVFIHEN 180
181 GIRFQSPLRT DSRIDILFSN IKNLIFQSCK GELIVVIHIH LKNPILMGKK KIQDVQFYRE 240
241 ASDMSVDETG
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
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Region A: Residues: [774-918] |
1 11 21 31 41 51
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1 GGRRGQSRFR RYGDEDELEQ EQEERRKRAA LDKEFKYFAD AIAEASNGLL TVENTFRDLG 60
61 FQGVPNRSAV FCMPTTDCLV QLIEPPFLVI NLEEVEICIL ERVQFGLKNF DMVFVYKDFN 120
121 KPVTHINTVP IESLDFLKQW LTDMD
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| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.600 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.403 | a.26.1 | 4-helical cytokines |
| View | Download | 0.460 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.558 | d.110.1 | Profilin (actin-binding protein) |
| View | Download | 0.429 | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.390 | d.218.1 | Nucleotidyltransferase |
| View | Download | 0.368 | d.110.2 | GAF domain-like |
| View | Download | 0.368 | a.39.1 | EF-hand |
| View | Download | 0.362 | a.1.1 | Globin-like |
| View | Download | 0.362 | d.60.1 | Probable bacterial effector-binding domain |
| View | Download | 0.349 | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.337 | a.63.1 | Apolipophorin-III |
| View | Download | 0.326 | b.55.1 | PH domain-like |
| View | Download | 0.316 | a.19.1 | Fertilization protein |
| View | Download | 0.316 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.307 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.302 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.287 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.278 | b.1.1 | Immunoglobulin |
| View | Download | 0.273 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.242 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.227 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.223 | d.79.3 | L30e-like |
| View | Download | 0.222 | d.19.1 | MHC antigen-recognition domain |
| View | Download | 0.206 | a.1.1 | Globin-like |
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Region A: Residues: [919-1035] |
1 11 21 31 41 51
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1 IPYTVSTINL NWATIMKSLQ DDPYQFFLDG GWNFLATGSD DEASDESEEE VSEYEASEDD 60
61 VSDESAFSED EEGSEVDDDI SGDESEDYTG DESEEGEDWD ELEKKAARAD RGANFRD
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
