| Protein: | HUL5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 910 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HUL5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..910] | [1..910] |
|
|
0.0 | [288..910] | [476..1066] |
|
|
0.0 | [235..909] | [214..871] |
|
|
0.0 | [235..909] | [228..884] |
|
Region A: Residues: [1-323] |
1 11 21 31 41 51
| | | | | |
1 MLNFTGQTRR RNVNLGNRTR NSKKDLLEKA KRERERRAQD KLKEDASKTI QKSIRRHFSN 60
61 VRLFKNTFTS SQLVHMIPAY GGKLIYYISQ YDLQQLLKLS HNFLSSYPNS LGNRQLLSLL 120
121 KLYQDDALVA ETLSDLNMDC PTVDEFLDSL SVYLCRASFL SYSSASKLAD VIEAWEVMHS 180
181 SASISIFSIS IGSYEKRPFA LQFYCILAER NLLPQLINTN PILWDNMAKT YSHCSKGGQK 240
241 NIAKLLIPNF NNHIAPSVLR SDNDYVLKFY EKAFIDEVIA TTANYVSDED HVKNLMCYIA 300
301 SSPNQSCKNS VLITLLSNKD FVR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [324-458] |
1 11 21 31 41 51
| | | | | |
1 RLSWEFFHTK FNASKTEAHP LFSVLAQLID MHLLISTDRE LLDYNSVIPI EELKKFTSTL 60
61 KDFTFRQYWE LPKSERNPML KEAVPLLSKV YERDSRLHFL STENNPTYWE NSEKQFLNLR 120
121 FYEELQEYED LYREH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.872 | 0.024 | protein polyubiquitination | a.24.12 | Outer surface protein C (OspC) |
|
Region A: Residues: [459-549] |
1 11 21 31 41 51
| | | | | |
1 LEEESDEDME KEIDLDKERP PLKSLLLNKM KKRLKSSLRF RKLEILLELP FFIPFEERVD 60
61 LFYMFIALDK KRLSLDDDHN LINMFTPWAS T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [550-596] |
1 11 21 31 41 51
| | | | | |
1 GMRKQSAIIS RDNVLEDAFN AFNSIGERFK ASLDVTFINE FGEEAGI
|
| Detection Method: | |
| Confidence: | 504.228787 |
| Match: | 1c4zA_ |
| Description: | Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [597-695] |
1 11 21 31 41 51
| | | | | |
1 DGGGITKEFL TTVSDEGFKD PKHELFRTND RYELYPSVVY DATKLKYIWF LGKVVGKCLY 60
61 EHVLIDVSFA DFFLKKLLNY SNGFLSSFSD LGSYDSVLY
|
|
Region B: Residues: [752-794] |
1 11 21 31 41 51
| | | | | |
1 TDYKLNKRCF KPVSAFHGGL SVIIAPHWME MFNSIELQML ISG
|
| Detection Method: | |
| Confidence: | 504.228787 |
| Match: | 1c4zA_ |
| Description: | Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap) |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [696-751] |
1 11 21 31 41 51
| | | | | |
1 NNLIKLLNMT TDEIKSLDLT FEIDEPESSA KVVDLIPNGS KTYVTKDNVL LYVTKV
|
|
Region B: Residues: [795-910] |
1 11 21 31 41 51
| | | | | |
1 ERDNIDLDDL KSNTEYGGYK EEDQTIVDFW EVLNEFKFEE KLNFLKFVTS VPQAPLQGFK 60
61 ALDPKFGIRN AGTEKYRLPT ASTCVNLLKL PDYRNKTILR EKLLYAINSG ARFDLS
|
| Detection Method: | |
| Confidence: | 504.228787 |
| Match: | 1c4zA_ |
| Description: | Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap) |
| Matching Structure (courtesy of the PDB): |
|
