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View Structure Prediction Details

Protein: YER121W
Organism: Saccharomyces cerevisiae
Length: 114 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YER121W.

Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSRWHDKN SRPAEEKSEE MQQDAHYYAL AASDSLNASV SNEYGNQVMN SFWKVGIDSP  60
   61 YVDDEAIRNR DVENNLPSLK QSVYNANEPN ATSSAFSTAS YAHETFDFRN LKLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.464 a.4.5 "Winged helix" DNA-binding domain
View Download 0.446 a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.334 a.7.7 BAG domain
View Download 0.280 a.177.1 Sigma2 domain of RNA polymerase sigma factors
View Download 0.264 a.118.9 ENTH/VHS domain
View Download 0.257 a.40.1 Calponin-homology domain, CH-domain
View Download 0.219 a.4.12 TrpR-like
View Download 0.214 a.118.9 ENTH/VHS domain
View Download 0.208 a.79.1 Antitermination factor NusB
View Download 0.204 a.29.4 RecG, N-terminal domain
View Download 0.202 a.4.12 TrpR-like

Predicted functions:

Term Confidence Notes
binding 0.778872331808332 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle