| Protein: | HOM3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 527 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HOM3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..527] | [1..527] |
|
|
0.0 | [7..523] | [82..577] |
|
|
0.0 | [7..523] | [89..581] |
|
|
0.0 | [7..523] | [87..582] |
|
|
0.0 | [7..523] | [79..572] |
|
Region A: Residues: [1-339] |
1 11 21 31 41 51
| | | | | |
1 MPMDFQPTSS HSNWVVQKFG GTSVGKFPVQ IVDDIVKHYS KPDGPNNNVA VVCSARSSYT 60
61 KAEGTTSRLL KCCDLASQES EFQDIIEVIR QDHIDNADRF ILNPALQAKL VDDTNKELEL 120
121 VKKYLNASKV LGEVSSRTVD LVMSCGEKLS CLFMTALCND RGCKAKYVDL SHIVPSDFSA 180
181 SALDNSFYTF LVQALKEKLA PFVSAKERIV PVFTGFFGLV PTGLLNGVGR GYTDLCAALI 240
241 AVAVNADELQ VWKEVDGIFT ADPRKVPEAR LLDSVTPEEA SELTYYGSEV IHPFTMEQVI 300
301 RAKIPIRIKN VQNPLGNGTI IYPDNVAKKG ESTPPHPPE
|
| Detection Method: |  |
| Confidence: | 18.39794 |
| Match: | 1gs5A_ |
| Description: | N-acetyl-l-glutamate kinase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| acetolactate synthase activity | 3.48670706716817 | bayes_pls_golite062009 |
| aspartate kinase activity | 3.23731032633773 | bayes_pls_golite062009 |
| transferase activity | 3.047646907595 | bayes_pls_golite062009 |
| catalytic activity | 2.83338756483354 | bayes_pls_golite062009 |
| kinase activity | 2.6815187488202 | bayes_pls_golite062009 |
| phosphotransferase activity, carboxyl group as acceptor | 2.65970393362911 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 2.63366715780289 | bayes_pls_golite062009 |
| amino acid kinase activity | 2.38310367076654 | bayes_pls_golite062009 |
| transferase activity, transferring aldehyde or ketonic groups | 2.27460110663386 | bayes_pls_golite062009 |
| acetylglutamate kinase activity | 1.28891782911186 | bayes_pls_golite062009 |
| glutamate 5-kinase activity | 0.416864856459166 | bayes_pls_golite062009 |
| binding | 0.416787048641206 | bayes_pls_golite062009 |
|
Region A: Residues: [340-527] |
1 11 21 31 41 51
| | | | | |
1 NLSSSFYEKR KRGATAITTK NDIFVINIHS NKKTLSHGFL AQIFTILDKY KLVVDLISTS 60
61 EVHVSMALPI PDADSLKSLR QAEEKLRILG SVDITKKLSI VSLVGKHMKQ YIGIAGTMFT 120
121 TLAEEGINIE MISQGANEIN ISCVINESDS IKALQCIHAK LLSERTNTSN QFEHAIDERL 180
181 EQLKRLGI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
