| Protein: | TRS31 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 283 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRS31.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..283] | [1..283] |
|
|
3.0E-67 | [104..278] | [9..205] |
|
|
5.0E-65 | [43..279] | [11..191] |
|
|
2.0E-64 | [43..279] | [11..191] |
|
|
2.0E-42 | [166..278] | [67..177] |
|
|
7.0E-42 | [162..278] | [60..181] |
|
|
2.0E-39 | [121..280] | [29..239] |
|
|
0.001 | [54..136] | [2..84] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MSQRIIQPSA SDQQFPGKSD GYEYTVGPKQ AITSEASTTY IPSRIYSESL LFKRQEASLS 60
61 AMAFLFQEMI SQLHRTCKTA GDFETKLSDY GHNIGIRLLE LLNFRASVSP SSLPRASAFL 120
121 SQNESSSKLS NASNSPGMLA NSSTATSA
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.429 | 0.222 | ER to Golgi vesicle-mediated transport | a.1.1 | Globin-like |
| View | Download | 0.571 | 0.205 | ER to Golgi vesicle-mediated transport | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.583 | 0.043 | ER to Golgi vesicle-mediated transport | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.358 | 0.042 | ER to Golgi vesicle-mediated transport | c.14.1 | ClpP/crotonase |
| View | Download | 0.501 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.356 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.344 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.325 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.320 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.297 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.280 | N/A | N/A | c.95.1 | Thiolase-like |
| View | Download | 0.277 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.264 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.264 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.264 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.263 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.258 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.253 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.253 | N/A | N/A | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.244 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.230 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.224 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.223 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.220 | N/A | N/A | d.56.1 | GroEL-intermediate domain like |
| View | Download | 0.220 | N/A | N/A | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.220 | N/A | N/A | a.148.1 | Arp2/3 complex 21 kDa subunit ARPC3 |
| View | Download | 0.219 | N/A | N/A | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.218 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.218 | N/A | N/A | d.13.1 | HIT-like |
| View | Download | 0.217 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.209 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.206 | N/A | N/A | a.1.1 | Globin-like |
| Term | Confidence | Notes |
| Rab guanyl-nucleotide exchange factor activity | 5.6079912636527 | bayes_pls_golite062009 |
| binding | 1.61860097455426 | bayes_pls_golite062009 |
| protein binding | 0.704339182896017 | bayes_pls_golite062009 |
|
Region A: Residues: [149-283] |
1 11 21 31 41 51
| | | | | |
1 SANERLQEKQ TESLSNYITK MRRRDLKILD ILQFIHGTLW SYLFNHVSDD LVKSSERDNE 60
61 YMIVDNFPTL TQFIPGENVS CEYFVCGIIK GFLFNAGFPC GVTAHRMPQG GHSQRTVYLI 120
121 QFDRQVLDRE GLRFG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.299 | 0.295 | ER to Golgi vesicle-mediated transport | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.332 | 0.059 | ER to Golgi vesicle-mediated transport | a.22.1 | Histone-fold |
| View | Download | 0.461 | 0.014 | ER to Golgi vesicle-mediated transport | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.453 | 0.004 | ER to Golgi vesicle-mediated transport | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.309 | N/A | N/A | d.41.2 | Quinolinic acid phosphoribosyltransferase (Nicotinate-nucleotide pyrophosphorylase, NadC), N-terminal domain |
| View | Download | 0.299 | N/A | N/A | c.16.1 | Lumazine synthase |
| View | Download | 0.298 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.254 | N/A | N/A | d.2.1 | Lysozyme-like |
| View | Download | 0.253 | N/A | N/A | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.252 | N/A | N/A | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.242 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.231 | N/A | N/A | c.13.1 | C-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.228 | N/A | N/A | d.89.1 | Origin of replication-binding domain, RBD-like |
| View | Download | 0.215 | N/A | N/A | c.12.1 | Ribosomal proteins L15p and L18e |
| View | Download | 0.211 | N/A | N/A | d.75.2 | DNA repair protein MutS, domain I |
| View | Download | 0.202 | N/A | N/A | a.25.1 | Ferritin-like |
