| Protein: | SIP1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 863 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIP1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..863] | [1..863] |
|
|
4.0E-76 | [553..851] | [225..484] |
|
|
5.0E-41 | [707..850] | [99..223] |
|
|
3.0E-40 | [706..851] | [162..286] |
|
|
2.0E-39 | [706..850] | [160..285] |
|
Region A: Residues: [1-483] |
1 11 21 31 41 51
| | | | | |
1 MVDISDTSGY LHKQGVLPSV SFICTSFFAC GLTSWKVELS YYIVVAAAMG NSPSTQDPSH 60
61 STKKEHGHHF HDAFNKDRQG SITSQLFNNR KSTHKRRASH TSEHNGAIPP RMQLLASHDP 120
121 STDCDGRMSS DTTIDKGPSH LFKKDYSLSS AADVNDTTLA NLTLSDDHDV GAPEEQVKSP 180
181 SFLSPGPSMA TVKRTKSDLD DLSTLNYTMV DETTENERND KPHHERHRSS IIALKKNLLE 240
241 SSATASPSPT RSSSVHSASL PALTKTDSID IPVRQPYSKK PSIHAYQYQY LNNDETFSEN 300
301 SQMDKEGNSD SVDAEAGVLQ SEDMVLNQSL LQNALKKDMQ RLSRVNSSNS MYTAERISHA 360
361 NNNGNIENNT RNKGNAGGSN DDFTAPISAT AKMMMKLYGD KTLMERDLNK HHNKTKKAQN 420
421 KKIRSVSNSR RSSFASLHSL QSRKSILTNG LNLQPLHPLH PIINDNESQY SAPQHREISH 480
481 HSN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [484-677] |
1 11 21 31 41 51
| | | | | |
1 SMSSMSSISS TNSTENTLVV LKWKDDGTVA ATTEVFIVST DIASALKEQR ELTLDENASL 60
61 DSEKQLNPRI RMVYDDVHKE WFVPDLFLPA GIYRLQFSIN GILTHSNFLP TATDSEGNFV 120
121 NWFEVLPGYH TIEPFRNEAD IDSQVEPTLD EELPKRPELK RFPSSSRKSS YYSAKGVERP 180
181 STPFSDYRGL SRSS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [678-863] |
1 11 21 31 41 51
| | | | | |
1 SINMRDSFVR LKASSLDLMA EVKPERLVYS NEIPNLFNIG DGSTISVKGD SDDVHPQEPP 60
61 SFTHRVVDCN QDDLFATLQQ GGNIDAETAE AVFLSRYPVP DLPIYLNSSY LNRILNQSNQ 120
121 NSESHERDEG AINHIIPHVN LNHLLTSSIR DEIISVACTT RYEGKFITQV VYAPCYYKTQ 180
181 KSQISN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [551-863] |
1 11 21 31 41 51
| | | | | |
1 PRIRMVYDDV HKEWFVPDLF LPAGIYRLQF SINGILTHSN FLPTATDSEG NFVNWFEVLP 60
61 GYHTIEPFRN EADIDSQVEP TLDEELPKRP ELKRFPSSSR KSSYYSAKGV ERPSTPFSDY 120
121 RGLSRSSSIN MRDSFVRLKA SSLDLMAEVK PERLVYSNEI PNLFNIGDGS TISVKGDSDD 180
181 VHPQEPPSFT HRVVDCNQDD LFATLQQGGN IDAETAEAVF LSRYPVPDLP IYLNSSYLNR 240
241 ILNQSNQNSE SHERDEGAIN HIIPHVNLNH LLTSSIRDEI ISVACTTRYE GKFITQVVYA 300
301 PCYYKTQKSQ ISN
|
| Detection Method: | |
| Confidence: | 85.0 |
| Match: | 2qlvB |
| Description: | No description for 2qlvB was found. |
| Term | Confidence | Notes |
| AMP-activated protein kinase activity | 4.78975226545815 | bayes_pls_golite062009 |
| binding | 2.22611204798233 | bayes_pls_golite062009 |
| protein binding | 1.50286160643298 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.21252601175223 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.20869454170074 | bayes_pls_golite062009 |
| kinase activity | 1.1759320472197 | bayes_pls_golite062009 |
| protein kinase activity | 1.16294708854294 | bayes_pls_golite062009 |
| cation channel activity | 1.10928620793874 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 1.08920948133636 | bayes_pls_golite062009 |
| ligand-gated channel activity | 1.08920948133636 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.03266511838083 | bayes_pls_golite062009 |
| gated channel activity | 0.9831902560942 | bayes_pls_golite062009 |
| ion channel activity | 0.88499192552319 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.726369450752205 | bayes_pls_golite062009 |
| transferase activity | 0.563590737734601 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.24498703916422 | bayes_pls_golite062009 |
| actin binding | 0.15943777627145 | bayes_pls_golite062009 |
| hydrolase activity | 0.0943317805489587 | bayes_pls_golite062009 |
