| Protein: | DPL1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 589 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DPL1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..589] | [1..589] |
|
|
0.0 | [86..541] | [6..482] |
|
|
0.0 | [94..540] | [4..471] |
|
|
0.0 | [96..541] | [6..472] |
|
|
0.0 | [94..542] | [39..507] |
|
|
0.0 | [95..541] | [5..472] |
|
|
0.0 | [96..541] | [6..472] |
|
|
0.0 | [94..542] | [39..507] |
|
Region A: Residues: [1-79] |
1 11 21 31 41 51
| | | | | |
1 MSGVSNKTVS INGWYGMPIH LLREEGDFAQ FMILTINELK IAIHGYLRNT PWYNMLKDYL 60
61 FVIFCYKLIS NFFYLLKVY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [80-162] |
1 11 21 31 41 51
| | | | | |
1 GPVRLAVRTY EHSSRRLFRW LLDSPFLRGT VEKEVTKVKQ SIEDELIRSD SQLMNFPQLP 60
61 SNGIPQDDVI EELNKLNDLI PHT
|
| Detection Method: | |
| Confidence: | 107.0 |
| Match: | 1js3A_ |
| Description: | DOPA decarboxylase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| serine C-palmitoyltransferase activity | 4.27273846204139 | bayes_pls_golite062009 |
| C-palmitoyltransferase activity | 4.27273846204139 | bayes_pls_golite062009 |
| catalytic activity | 2.29878871754893 | bayes_pls_golite062009 |
| transferase activity, transferring nitrogenous groups | 1.18577404365776 | bayes_pls_golite062009 |
| transaminase activity | 1.15255422926249 | bayes_pls_golite062009 |
| transferase activity | 0.737426388870721 | bayes_pls_golite062009 |
| transcription regulator activity | 0.691073358419788 | bayes_pls_golite062009 |
| binding | 0.661198018681765 | bayes_pls_golite062009 |
| DNA binding | 0.579562080072574 | bayes_pls_golite062009 |
| nucleic acid binding | 0.547593348248892 | bayes_pls_golite062009 |
| C-acyltransferase activity | 0.46392133442786 | bayes_pls_golite062009 |
| transcription factor activity | 0.352624414131738 | bayes_pls_golite062009 |
| 4-aminobutyrate transaminase activity | 0.122706514261728 | bayes_pls_golite062009 |
|
Region A: Residues: [163-589] |
1 11 21 31 41 51
| | | | | |
1 QWKEGKVSGA VYHGGDDLIH LQTIAYEKYC VANQLHPDVF PAVRKMESEV VSMVLRMFNA 60
61 PSDTGCGTTT SGGTESLLLA CLSAKMYALH HRGITEPEII APVTAHAGFD KAAYYFGMKL 120
121 RHVELDPTTY QVDLGKVKKF INKNTILLVG SAPNFPHGIA DDIEGLGKIA QKYKLPLHVD 180
181 SCLGSFIVSF MEKAGYKNLP LLDFRVPGVT SISCDTHKYG FAPKGSSVIM YRNSDLRMHQ 240
241 YYVNPAWTGG LYGSPTLAGS RPGAIVVGCW ATMVNMGENG YIESCQEIVG AAMKFKKYIQ 300
301 ENIPDLNIMG NPRYSVISFS SKTLNIHELS DRLSKKGWHF NALQKPVALH MAFTRLSAHV 360
361 VDEICDILRT TVQELKSESN SKPSPDGTSA LYGVAGSVKT AGVADKLIVG FLDALYKLGP 420
421 GEDTATK
|
| Detection Method: | |
| Confidence: | 107.0 |
| Match: | 1js3A_ |
| Description: | DOPA decarboxylase |
| Matching Structure (courtesy of the PDB): |
|
