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View Structure Prediction Details

Protein: YDR250C
Organism: Saccharomyces cerevisiae
Length: 91 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YDR250C.

Predicted Domain #1
Region A:
Residues: [1-91]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGLVIIDMN NFAIVYANIT FLFYYLLDFT LPFHVCRFLF HSSLENGPQH GQQGAATISR  60
   61 RAHCEKSHPS YYCTQKNMEA NRQCYVNGTK T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.607 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.573 a.24.13 Domain of the SRP/SRP receptor G-proteins
View Download 0.535 d.74.5 Hypothetical protein Yml108w
View Download 0.480 a.4.5 "Winged helix" DNA-binding domain
View Download 0.474 d.79.2 Tubulin/Dihydroxyacetone kinase C-terminal domain
View Download 0.473 a.4.5 "Winged helix" DNA-binding domain
View Download 0.464 a.76.1 Iron-dependent represor protein, dimerization domain
View Download 0.460 a.46.2 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain
View Download 0.453 d.68.1 Translation initiation factor IF3, C-terminal domain
View Download 0.442 a.4.5 "Winged helix" DNA-binding domain
View Download 0.442 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.419 d.68.7 R3H domain
View Download 0.406 a.64.1 Saposin
View Download 0.405 a.181.1 Antibiotic binding domain of TipA-like multidrug resistance regulators
View Download 0.381 a.4.5 "Winged helix" DNA-binding domain
View Download 0.371 a.24.15 FAD-dependent thiol oxidase
View Download 0.358 a.118.11 Cytochrome c oxidase subunit E
View Download 0.357 a.74.1 Cyclin-like
View Download 0.357 a.23.4 Mitochondrial import receptor subunit Tom20
View Download 0.347 d.206.1 YggU-like
View Download 0.343 b.9.1 Neurophysin II
View Download 0.335 a.4.5 "Winged helix" DNA-binding domain
View Download 0.332 a.52.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
View Download 0.327 a.60.9 lambda integrase-like, N-terminal domain
View Download 0.320 d.58.48 MTH1187-like
View Download 0.313 a.64.2 Bacteriocin AS-48
View Download 0.306 a.118.8 TPR-like
View Download 0.305 a.4.9 Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3
View Download 0.303 a.28.3 Retrovirus capsid protein C-terminal domain
View Download 0.293 a.4.5 "Winged helix" DNA-binding domain
View Download 0.284 d.68.5 C-terminal domain of ProRS
View Download 0.277 a.156.1 S13-like H2TH domain
View Download 0.264 d.95.2 Homing endonucleases
View Download 0.263 a.4.5 "Winged helix" DNA-binding domain
View Download 0.262 a.4.6 C-terminal effector domain of the bipartite response regulators
View Download 0.257 a.118.14 FliG
View Download 0.247 f.17.1 F1F0 ATP synthase subunit C
View Download 0.245 a.39.3 Cloroperoxidase
View Download 0.244 d.15.1 Ubiquitin-like
View Download 0.243 d.68.3 SirA-like
View Download 0.236 d.79.3 L30e-like
View Download 0.233 a.4.5 "Winged helix" DNA-binding domain
View Download 0.228 d.15.4 2Fe-2S ferredoxin-like
View Download 0.220 d.15.7 Immunoglobulin-binding domains
View Download 0.218 c.84.1 Phosphoglucomutase, first 3 domains
View Download 0.215 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.215 a.4.5 "Winged helix" DNA-binding domain
View Download 0.214 a.71.1 Endoplasmic reticulum protein ERP29, C-domain
View Download 0.212 a.61.1 Retroviral matrix proteins
View Download 0.210 a.4.1 Homeodomain-like
View Download 0.208 a.64.1 Saposin
View Download 0.208 a.4.5 "Winged helix" DNA-binding domain
View Download 0.207 a.64.1 Saposin
View Download 0.207 c.47.1 Thioredoxin-like
View Download 0.205 a.29.2 Bromodomain
View Download 0.203 a.65.1 Annexin
View Download 0.202 d.26.1 FKBP-like
View Download 0.201 d.95.2 Homing endonucleases

Predicted functions:

Term Confidence Notes
binding 0.148252783584283 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle