Protein: | RTN1 |
Organism: | Saccharomyces cerevisiae |
Length: | 295 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RTN1.
Description | E-value | Query Range |
Subject Range |
|
2.0E-82 | [1..295] | [1..295] |
|
2.0E-65 | [5..207] | [70..270] |
|
3.0E-61 | [5..206] | [79..278] |
|
5.0E-50 | [19..230] | [271..471] |
Region A: Residues: [1-219] |
1 11 21 31 41 51 | | | | | | 1 MSASAQHSQA QQQQQQKSCN CDLLLWRNPV QTGKYFGGSL LALLILKKVN LITFFLKVAY 60 61 TILFTTGSIE FVSKLFLGQG LITKYGPKEC PNIAGFIKPH IDEALKQLPV FQAHIRKTVF 120 121 AQVPKHTFKT AVALFLLHKF FSWFSIWTIV FVADIFTFTL PVIYHSYKHE IDATVAQGVE 180 181 ISKQKTQEFS QMACEKTKPY LDKVESKLGP ISNLVKSKT |
Detection Method: | |
Confidence: | 78.283997 |
Match: | PF02453 |
Description: | Reticulon |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [220-295] |
1 11 21 31 41 51 | | | | | | 1 APVSSTAGPQ TASTSKLAAD VPLEPESKAY TSSAQVMPEV PQHEPSTTQE FNVDELSNEL 60 61 KKSTKNLQNE LEKNNA |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.