| Protein: | SWF1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 336 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SWF1.
| Description | E-value | Query Range |
Subject Range |
|
|
7.0E-66 | [1..336] | [1..336] |
|
|
2.0E-51 | [9..289] | [3..299] |
|
|
3.0E-49 | [39..289] | [1..256] |
|
|
3.0E-47 | [3..303] | [297..614] |
|
|
6.0E-45 | [11..277] | [45..293] |
|
Region A: Residues: [1-118] |
1 11 21 31 41 51
| | | | | |
1 MSWNLLFVLL IGFVVLILLS PVFKSTWPFS TFYRNVFQPF LVDDQKYRWK LHLVPLFYTS 60
61 IYLYLVYTYH MRVESTIKNE LFLLERILIV PIIILPPVAL GILAMVSRAE DSKDHKSG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.860 | a.7.1 | Spectrin repeat |
| View | Download | 0.763 | a.47.2 | t-snare proteins |
| View | Download | 0.669 | a.133.1 | Phospholipase A2, PLA2 |
| View | Download | 0.662 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.659 | a.7.8 | GAT domain |
|
Region A: Residues: [119-206] |
1 11 21 31 41 51
| | | | | |
1 STEEYPYDYL LYYPAIKCST CRIVKPARSK HCSICNRCVL VADHHCIWIN NCIGKGNYLQ 60
61 FYLFLISNIF SMCYAFLRLW YISLNSTS
|
| Detection Method: | |
| Confidence: | 34.920819 |
| Match: | PF01529 |
| Description: | DHHC zinc finger domain |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
| Term | Confidence | Notes |
| histone acetyltransferase activity | 2.27787208911046 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 2.27787208911046 | bayes_pls_golite062009 |
| binding | 2.26426010117912 | bayes_pls_golite062009 |
| protein transporter activity | 1.41828558915713 | bayes_pls_golite062009 |
| protein binding | 1.35218914294914 | bayes_pls_golite062009 |
| transporter activity | 1.33264421804057 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.33198351552985 | bayes_pls_golite062009 |
| phosphoinositide binding | 1.19034196920111 | bayes_pls_golite062009 |
| phospholipid binding | 1.09010543599677 | bayes_pls_golite062009 |
| transcription regulator activity | 1.00368169716135 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.929797787738847 | bayes_pls_golite062009 |
| DNA binding | 0.919146751776512 | bayes_pls_golite062009 |
| nucleic acid binding | 0.788911508084267 | bayes_pls_golite062009 |
| N-acyltransferase activity | 0.565596821175093 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 0.514633973697725 | bayes_pls_golite062009 |
| histone binding | 0.335672312059968 | bayes_pls_golite062009 |
| 0.308979985902751 | bayes_pls_golite062009 | |
| phosphatidylinositol binding | 0.251953910109229 | bayes_pls_golite062009 |
| ligase activity | 0.161281682592326 | bayes_pls_golite062009 |
| transcription factor activity | 0.0724499929149738 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0446344906851331 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.00643795263722946 | bayes_pls_golite062009 |
|
Region A: Residues: [207-336] |
1 11 21 31 41 51
| | | | | |
1 TLPRAVLTLT ILCGCFTIIC AIFTYLQLAI VKEGMTTNEQ DKWYTIQEYM REGKLVRSLD 60
61 DDCPSWFFKC TEQKDDAAEP LQDQHVTFYS TNAYDHKHYN LTHYITIKDA SEIPNIYDKG 120
121 TFLANLTDLI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.578 | 0.304 | integral to membrane | a.47.2 | t-snare proteins |
| View | Download | 0.518 | 0.054 | integral to membrane | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.568 | 0.002 | integral to membrane | a.1.1 | Globin-like |
| View | Download | 0.509 | 0.001 | integral to membrane | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.571 | 0.000 | integral to membrane | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.578 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.571 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.568 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.518 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.509 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.499 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.461 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.453 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.448 | N/A | N/A | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.440 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.428 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.414 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.398 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.396 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.382 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.379 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.368 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.364 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.364 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.362 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.360 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.352 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.343 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.322 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.312 | N/A | N/A | a.7.2 | Enzyme IIa from lactose specific PTS, IIa-lac |
| View | Download | 0.307 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.300 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.293 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.280 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.278 | N/A | N/A | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.274 | N/A | N/A | a.69.1 | C-terminal domain of alpha and beta subunits of F1 ATP synthase |
| View | Download | 0.263 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.260 | N/A | N/A | a.182.1 | GatB/YqeY domain |
| View | Download | 0.255 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.243 | N/A | N/A | a.70.1 | N-terminal domain of the delta subunit of the F1F0-ATP synthase |
| View | Download | 0.243 | N/A | N/A | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.235 | N/A | N/A | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
| View | Download | 0.226 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.224 | N/A | N/A | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.222 | N/A | N/A | d.2.1 | Lysozyme-like |
| View | Download | 0.222 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.213 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.213 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.209 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.205 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.204 | N/A | N/A | a.7.7 | BAG domain |
| View | Download | 0.204 | N/A | N/A | a.118.8 | TPR-like |
| View | Download | 0.200 | N/A | N/A | a.47.1 | STAT |
| View | Download | 0.200 | N/A | N/A | e.34.1 | NSP3 homodimer |
