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View Structure Prediction Details

Protein: YDR124W
Organism: Saccharomyces cerevisiae
Length: 324 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR124W.

Description E-value Query
Range
Subject
Range
YD124_YEAST - Uncharacterized protein YDR124W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR124W ...
YDR124W - Putative protein of unknown function; non-essential gene; expression is strongly induced by alpha fa...
0.0 [1..324] [1..324]
gi|11596254 - gi|11596254|gb|AAG38543.1|AF309805_8 Ydr124wp-like protein [Pneumocystis carinii f. sp. carinii]
3.0E-34 [92..162] [78..148]

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Predicted Domain #1
Region A:
Residues: [1-63]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIGMEELRR ALALLNGQGY EFMVFIKEKD HLISESIPKN LFSESFISSS IEKNPPLTFD  60
   61 PLV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.964 d.58.23 Probable ACP-binding domain of malonyl-CoA ACP transacylase

Predicted Domain #2
Region A:
Residues: [64-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRKRITVYEE NIQPAIMLPL DQPLLIQNYL YTAFKLLRQV PCKAIAKLWI KIIEPRKKTR  60
   61 FPYIKGNAGR PEWWPKDVEH KEPDHLQKAD RLKLMCTIIM NV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [166-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LPQSPFSLEI LDELTGVTAA MTIFKKETVK KVIMKNVFEI AKCLCNKDFK QKTISLDDLN  60
   61 DLAQKQKKSY HSRRFDVNKM VKVEKDLLQQ SSGSDSSPSM ILPSKESDTE YFPREYPKDP 120
  121 VSEDYSNSIS RLENLVEFDP LFLTKLDELT SSDDCKDFI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle