| Protein: | GSG1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 698 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GSG1.
| Description | E-value | Query Range |
Subject Range |
|
|
1215.0 | [0..1] | [698..1] |
|
|
757.0 | [0..1] | [673..1] |
|
|
456.0 | [0..197] | [637..186] |
|
|
426.0 | [0..2] | [669..1] |
|
|
406.0 | [0..3] | [658..5] |
|
|
352.0 | [0..187] | [495..129] |
|
|
277.0 | [0..124] | [654..187] |
|
|
259.0 | [0..34] | [661..115] |
|
|
256.0 | [0..186] | [655..226] |
|
Region A: Residues: [1-327] |
1 11 21 31 41 51
| | | | | |
1 MVFSYEHYMN LLFHLDNSKE TVPPEIAKRI ISNAIAPVIT VTSTPLFDKH IQETYKVDSL 60
61 YMLLRFFGGC VSDRDQANEA KVGQHEHEVC DASDSTDSIP KNKNLEVPNL SKKGSRSRSN 120
121 SLFQRDSTQS QYIRFTRPLG DLIETRDAND MLFNYHSLEV FLDNYLKLVA ANTDEMVPHN 180
181 LLKKSIYHSF FSLAISSTNN LSPYETFNHP ILSLIALDIS NGEVYEDARD LLVNFKNLNH 240
241 NTENFPIFMN TNEMLPVFLL CYNDDSQEEF EKCQALAKKL KKQLFVESIL LALWKDSFIY 300
301 DENSVIQLHQ PVMSSLEEIL FFLQAPT
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [328-500] |
1 11 21 31 41 51
| | | | | |
1 QTTLSLALIN SIYDMLDYLV YDLMIPFMKR KVSFWEETIL QPRKSLFNGA KFFKKFMNKN 60
61 PVNGNHQHNS LTRDSQGNEY FASSSSEFLM RKLADWSMML SDFKTAYSTY ESLMDDLDAF 120
121 PKYLASCIEW CAVSLLMGAQ SIVTVKMIKN DINPLIERAL ATYENCSRIQ RGK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.748 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.712 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.708 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.684 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.613 | N/A | N/A | d.67.3 | Ribosome recycling factor, RRF |
| View | Download | 0.593 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.593 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.537 | N/A | N/A | a.118.13 | Arp2/3 complex 16 kDa subunit ARPC5 |
| View | Download | 0.519 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.314 | N/A | N/A | a.25.1 | Ferritin-like |
|
Region A: Residues: [501-698] |
1 11 21 31 41 51
| | | | | |
1 GKESNSLDVT EPVRSYETRC MILASELFLS LSNTWTSTPY AIQYLETILD ECKLGPCSQI 60
61 MVWERLSDCY NLRVDPRIKH RVGAMKKDAK DTEDLRGEHK YSTDHFTDED ILSEGLTRRR 120
121 KAAFFRLIAA KKWAEQKQWR QVSWCLKDIE STYSEIKFLH GNGLILSKLK NQLNLKDVDS 180
181 APRPSEKNLT RTSVSFIG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.406 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.397 | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
| View | Download | 0.389 | a.118.1 | ARM repeat |
| View | Download | 0.370 | a.287.1 | Description not found. |
| View | Download | 0.359 | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
| View | Download | 0.337 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.326 | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.326 | a.95.1 | Influenza virus matrix protein M1 |
| View | Download | 0.315 | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
