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Protein Overview: gi|9755838, gi|1...

General Information:
Name(s) found: gi|9755838 [NCBI NR]
gi|15237319 [NCBI NR]
gi|11358177 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|9755838|emb|CAC01869.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237319|ref|NP_197132.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T51498 hypothetical protein T21H19_200 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1265 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: biological_process [ND]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVEPVNSSLG KMLLEEISPV VMVLCTPLVE DTFLRNGLSF VETLKPFCNF SNIDVPVRTS  60
   61 SDQLYRLKKF TLRLFYASDI KQPNVEVAKQ RLERVITQAG EKDFQDLKSD PPQITDILSN 120
  121 PESEIAPSWF RYYNKELIRT LSFSDHEAFD HPVACLLVVS SKDEEPIKKF VDLFNSNRLP 180
  181 TDGTMDPNIL KHYLLVHDNQ DATTERTSKV LSEMRSQFGN NECNLLCTNS SKEGNVEHQA 240
  241 NPWASFKSSV SADKLGCALT GDDIVEQIKD LMQEFASRHI IPYMEQKVRE LNQQISATRK 300
  301 GLKNQFKNFL WRKGKDDNPD ATKGSMYAFL NSCSFYDYLD IFISSTDFAS TFEDYNIDKA 360
  361 WKHYAGVQEM RGLAYFISDQ PKKDSECMEN AFSTYMKLGK SGFQNATRCG LWWAEMLKAR 420
  421 DQHKEAASVY FRICGEEPLH AAVMLEQASY CFMLTKPAML HKYGFHLVLS GDHYKNCNQV 480
  481 NHAIRTYKSA ISVYKSTTWS HIKDHLYFHI GQWYAIVGMH DVAVRNMLKV LDCGYQSKAT 540
  541 QEIFLRDFFD IVKKTGMKHE VVGLQLPILN MSSLQVIYED HRTYASQASA LVEESIWQSL 600
  601 EDDIIPSLNS GKSNWLELQS KLLPKKYKES NVCVAGESVK LDLEFRNPLL ISTSITSVSL 660
  661 ICELTANSDD LKLVDNEPSG SSLSPEISTE HNQVTTSGFS SFTLSEVDFT LGGGEKKLVR 720
  721 LTVTPSEEGI LKIVGVRWEL SGSIVGVHYF QSVSVKAKTA RGRRKNKLTP TDALKFLVIK 780
  781 SLPRLEGSID HLPEKLYAGD LRYLVLELRN KSESPTKNLK MKISHPRFVS PGNHEEELTT 840
  841 EFPDCLKKGD EHNIVQRESN RTSSVFAFPK DVSLQGDRSL RWPLWLRAAI PGTISLYFTI 900
  901 YYEMENVSSM KYRTLRMHYN LQVLPSLQTS FKVTPSPSRL QEFLVRMDIV NRAKSDCFQI 960
  961 HQLSTVGCRW GISLLQPVDT ILPSKFLLAG QALSCFFMIK DCRKSGTEDE ETTSLPPSQT1020
 1021 DVKLYTQDDD EKLFDIVSSP LASFHESERS CQGPSVQVSP NTVDFILISR LAKSSSPSAV1080
 1081 PDLPKILSHH SCHNSIRSSS PISWSLDGPQ TIHHDFSTSL CEIKLKMVIR NTSDGISSVT1140
 1141 INTNDFLPDA AATTSSSGNQ SGWRYVPTIT EEMKLTSDVM GSRLGKPPSS MESSPPFIWS1200
 1201 GLSSTKIQIQ PLSTTEIPLQ ISVFSPGIYD LSSYELNWEL SEHESATSSG TCQGYPYYLT1260
 1261 VLQSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..228] MSA 2.053988 View MSA. No confident structure predictions are available.
    2 View Details [229..478] deduced N/A No confident structure predictions are available.
    3 View Details [479..622] MSA 1.090993 View MSA. No confident structure predictions are available.
    4 View Details [623..684] deduced N/A No confident structure predictions are available.
    5 View Details [685..790] MSA 2.085995 View MSA. No confident structure predictions are available.
    6 View Details [791..1033] deduced N/A No confident structure predictions are available.
    7 View Details [1034..1186] deduced N/A No confident structure predictions are available.
    8 View Details [1187..1265] MSA 1.051987 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle