YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: DET1
Organism: Saccharomyces cerevisiae
Length: 334 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DET1.

Description E-value Query
Range
Subject
Range
gi|151942041 - gi|151942041|gb|EDN60397.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190404979 - gi|190404979|gb|EDV08246.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
DET1_YEAST - Broad-range acid phosphatase DET1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DET1 P...
DET1 - Acid phosphatase involved in the non-vesicular transport of sterols in both directions between the e...
0.0 [1..334] [1..334]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
3.0E-59 [195..329] [83..213]
AT74H_ARATH - Phosphoglycerate mutase-like protein AT74H OS=Arabidopsis thaliana GN=At1g08940 PE=3 SV=2
2.0E-53 [24..312] [9..220]

Back

Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCEENVHVSE DVAGSHGSFT NARPRLIVLI RHGESESNKN KEVNGYIPNH LISLTKTGQI  60
   61 QARQAGIDLL RVLNVDDHNL VEDLAKKYIK DESSRRTLPL KDYTRLSREK DTNIVFYTSP 120
  121 YRRARETLKG ILDVIDEYNE LNSGVRICED MRYDPHGKQK HAFWPRGLNN TGGVYENNED 180
  181 NICEGKPGKC YLQYRVKDEP RIREQDFGNF QKINSMQDVM KKRSTYGHFF FRFPHGESAA 240
  241 DVYDRVASFQ ETLFRHFHDR QERRPRDVVV LVTHGIYSRV FLMKWFRWTY EEFESFTNVP 300
  301 NGSVMVMELD ESINRYVLRT VLPKWTDCEG DLTT

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 13.82
Match: 1fztA
Description: Phosphoglycerate mutase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.10423060351157 bayes_pls_golite062009
catalytic activity 0.738529726432395 bayes_pls_golite062009
protein binding 0.659594319664544 bayes_pls_golite062009
hydrolase activity 0.333859288842475 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle