Protein: | RPN5 |
Organism: | Saccharomyces cerevisiae |
Length: | 445 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPN5.
Description | E-value | Query Range |
Subject Range |
|
368.0 | [0..7] | [443..14] |
|
367.0 | [0..7] | [443..14] |
|
367.0 | [0..7] | [443..14] |
|
365.0 | [0..7] | [443..14] |
|
365.0 | [0..7] | [443..14] |
|
365.0 | [0..7] | [443..14] |
|
363.0 | [0..7] | [443..14] |
Region A: Residues: [1-101] |
1 11 21 31 41 51 | | | | | | 1 MSRDAPIKAD KDYSQILKEE FPKIDSLAQN DCNSALDQLL VLEKKTRQAS DLASSKEVLA 60 61 KIVDLLASRN KWDDLNEQLT LLSKKHGQLK LSIQYMIQKV M |
Region A: Residues: [102-222] |
1 11 21 31 41 51 | | | | | | 1 EYLKSSKSLD LNTRISVIET IRVVTENKIF VEVERARVTK DLVEIKKEEG KIDEAADILC 60 61 ELQVETYGSM EMSEKIQFIL EQMELSILKG DYSQATVLSR KILKKTFKNP KYESLKLEYY 120 121 N |
Region A: Residues: [223-370] |
1 11 21 31 41 51 | | | | | | 1 LLVKISLHKR EYLEVAQYLQ EIYQTDAIKS DEAKWKPVLS HIVYFLVLSP YGNLQNDLIH 60 61 KIQNDNNLKK LESQESLVKL FTTNELMRWP IVQKTYEPVL NEDDLAFGGE ANKHHWEDLQ 120 121 KRVIEHNLRV ISEYYSRITL LRLNELLD |
Region A: Residues: [371-445] |
1 11 21 31 41 51 | | | | | | 1 LTESQTETYI SDLVNQGIIY AKVNRPAKIV NFEKPKNSSQ LLNEWSHNVD ELLEHIETIG 60 61 HLITKEEIMH GLQAK |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.914 | N/A | N/A | d.58.4 | Dimeric alpha+beta barrel |