Protein: | LUG1 |
Organism: | Saccharomyces cerevisiae |
Length: | 153 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LUG1.
Description | E-value | Query Range |
Subject Range |
|
9.0E-47 | [1..153] | [1..153] |
|
2.0E-46 | [1..130] | [1..143] |
|
2.0E-44 | [1..133] | [1..146] |
|
3.0E-44 | [1..130] | [1..143] |
|
6.0E-42 | [1..130] | [1..141] |
|
7.0E-29 | [1..72] | [1..71] |
|
1.0E-20 | [8..74] | [6..71] |
Region A: Residues: [1-153] |
1 11 21 31 41 51 | | | | | | 1 MVTFNCEVCN DTVPKKNTEK HYYRCPNAYY TCIDCSKTFE DGVSYKNHTS CISEDEKYQK 60 61 ALYKGNKKQK QKQQQKQQQK QHQHQPVATP AKKVEKPVIK KAEKVEKTSN GIELHKGKSL 120 121 YKILKTMKDK GAKKTFLKSL VVDSEGQIRY AKE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
binding | 1.72893576328611 | bayes_pls_golite062009 |
nucleic acid binding | 1.69485293197742 | bayes_pls_golite062009 |
DNA binding | 1.56529962350735 | bayes_pls_golite062009 |
transcription regulator activity | 1.34618935906821 | bayes_pls_golite062009 |
transcription factor activity | 0.482168429405299 | bayes_pls_golite062009 |
Region A: Residues: [68-153] |
1 11 21 31 41 51 | | | | | | 1 KQKQKQQQKQ QQKQHQHQPV ATPAKKVEKP VIKKAEKVEK TSNGIELHKG KSLYKILKTM 60 61 KDKGAKKTFL KSLVVDSEGQ IRYAKE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.