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View Structure Prediction Details

Protein: YBR271W
Organism: Saccharomyces cerevisiae
Length: 419 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR271W.

Description E-value Query
Range
Subject
Range
YBR271W - Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family; green flu...
EFM2_YEAST - Protein-lysine N-methyltransferase EFM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=...
0.0 [1..419] [1..419]
gi|14585877, gi|... - gi|42475946|ref|NP_963892.1| hypothetical protein LOC196483 isoform 2 [Homo sapiens], gi|14585877|gb...
1.0E-48 [126..401] [6..279]
SPAC3A11.03 - methyltransferase
YEZ3_SCHPO - Uncharacterized protein C3A11.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3A11....
4.0E-33 [100..343] [28..243]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
3.0E-32 [101..343] [1..215]
ANM11_ARATH - Protein arginine N-methyltransferase 1.1 OS=Arabidopsis thaliana GN=PRMT11 PE=1 SV=1
6.0E-31 [230..419] [84..267]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDPLDLYTP DDIQVEALQF NLAEREPKDP CSPQRDEILT AVDEEESDDD DTIIDNLDLP  60
   61 SVKYAPPEVI LCILILLKPD RQVNFNQET

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKNKSVLEVC KSHGLEPDLL KRLLTWYTEE WPNKRLNSLE KICNKIPMLR FTVSKELLLG  60
   61 YYTSVLKKYN NSCGLNEEII QELLKELSSR ISENCGRTAQ PSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted functions:

Term Confidence Notes
transferase activity 0.569065423404044 bayes_pls_golite062009
catalytic activity 0.486907672100804 bayes_pls_golite062009
methyltransferase activity 0.155495931533276 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 0.145822362574272 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [193-419]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VRYFELRNLS TSIPLHEPSL TADNLGWKTW GSSLILSQLV VDHLDYLHTT NVNMLANSDI  60
   61 KQIKVLELGA GTGLVGLSWA LKWKELYGTE NIEIFVTDLP EIVTNLKKNV SLNNLGDFVQ 120
  121 AEILDWTNPH DFIDKFGHEN EFDVILIADP IYSPQHPEWV VNMISKFLAA SGTCHLEIPL 180
  181 RAKYAKEREV LKLLLKESDL KVVEERHSEG VDDWGAVKYL YRQIVRN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.39794
Match: 1f3lA_
Description: Arginine methyltransferase, HMT1
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle