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View Structure Prediction Details

Protein: YBR204C
Organism: Saccharomyces cerevisiae
Length: 375 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBR204C.

Description E-value Query
Range
Subject
Range
YBR204C - Serine hydrolase; YBR204C is not an essential gene
0.0 [1..375] [1..375]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMAERAEAT KSWSCEPLSG KTLEEIVQNA ENAADLVAYI RKPEVDLDFR LKFIAEHEEF  60
   61 FNEQLSDRNS RIRTCHNLSD KGIRG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [86-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DTVFVFVPGL AGNLEQFEPL LELVDSDQKA FLTLDLPGFG HSSEWSDYPM LKVVELIFVL  60
   61 VCDVLRKWST AVPNNDNVNP FNGHKIVLVG HSMGCFLACH LYEQHMADTK AVQTLVLLTP 120
  121 PKAHIEQLSK DKHIIQWALY GVFKLPWLFD VYRNKFDQVK GLQSSGIKQY FYQQGDDVKL 180
  181 KYRKFWQFKN NISNKSRTII GYLLGWETVD WVKFNGVLTQ TDMKQKIIIF GAEKDPIAPI 240
  241 ENLEFYKQTI NKECLRKVII LPDCSHNLCF DRPELVCENF QREVIDNSKL 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.346787
Match: PF00561
Description: alpha/beta hydrolase fold

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle