| Protein: | TAF5 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 798 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TAF5.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..798] | [1..798] |
|
|
0.0 | [351..797] | [821..1240] |
|
|
0.0 | [293..797] | [919..1431] |
|
|
0.0 | [49..680] | [2..576] |
|
Region A: Residues: [1-165] |
1 11 21 31 41 51
| | | | | |
1 MSQKQSTNQN QNGTHQPQPV KNQRTNNAAG ANSGQQPQQQ SQGQSQQQGR SNGPFSASDL 60
61 NRIVLEYLNK KGYHRTEAML RAESGRTLTP QNKQSPANTK TGKFPEQSSI PPNPGKTAKP 120
121 ISNPTNLSSK RDAEGGIVSS GRLEGLNAPE NYIRAYSMLK NWVDS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [166-402] |
1 11 21 31 41 51
| | | | | |
1 SLEIYKPELS YIMYPIFIYL FLNLVAKNPV YARRFFDRFS PDFKDFHGSE INRLFSVNSI 60
61 DHIKENEVAS AFQSHKYRIT MSKTTLNLLL YFLNENESIG GSLIISVINQ HLDPNIVESV 120
121 TAREKLADGI KVLSDSENGN GKQNLEMNSV PVKLGPFPKD EEFVKEIETE LKIKDDQEKQ 180
181 LNQQTAGDNY SGANNRTLLQ EYKAMNNEKF KDNTGDDDKD KIKDKIAKDE EKKESEL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [403-798] |
1 11 21 31 41 51
| | | | | |
1 KVDGEKKDSN LSSPARDILP LPPKTALDLK LEIQKVKESR DAIKLDNLQL ALPSVCMYTF 60
61 QNTNKDMSCL DFSDDCRIAA AGFQDSYIKI WSLDGSSLNN PNIALNNNDK DEDPTCKTLV 120
121 GHSGTVYSTS FSPDNKYLLS GSEDKTVRLW SMDTHTALVS YKGHNHPVWD VSFSPLGHYF 180
181 ATASHDQTAR LWSCDHIYPL RIFAGHLNDV DCVSFHPNGC YVFTGSSDKT CRMWDVSTGD 240
241 SVRLFLGHTA PVISIAVCPD GRWLSTGSED GIINVWDIGT GKRLKQMRGH GKNAIYSLSY 300
301 SKEGNVLISG GADHTVRVWD LKKATTEPSA EPDEPFIGYL GDVTASINQD IKEYGRRRTV 360
361 IPTSDLVASF YTKKTPVFKV KFSRSNLALA GGAFRP
|
| Detection Method: | |
| Confidence: | 291.512579 |
| Match: | 1erjA_ |
| Description: | Tup1, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [723-798] |
1 11 21 31 41 51
| | | | | |
1 LKKATTEPSA EPDEPFIGYL GDVTASINQD IKEYGRRRTV IPTSDLVASF YTKKTPVFKV 60
61 KFSRSNLALA GGAFRP
|
| Detection Method: | |
| Confidence: | 97.045757 |
| Match: | 1vyhC |
| Description: | PAF-AH Holoenzyme: Lis1/Alfa2 |
Matching Structure (courtesy of the PDB): |
|
