| Protein: | YRO2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 344 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YRO2.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-89 | [1..294] | [1..295] |
|
|
5.0E-66 | [13..305] | [8..284] |
|
|
5.0E-62 | [12..296] | [2..277] |
|
|
1.0E-56 | [20..270] | [19..267] |
|
|
2.0E-55 | [20..264] | [39..285] |
|
Region A: Residues: [1-86] |
1 11 21 31 41 51
| | | | | |
1 MSDYVELLKR GGNEAIKINP PTGADFHITS RGSDWLFTVF CVNLLFGVIL VPLMFRKPVK 60
61 DRFVYYTAIA PNLFMSIAYF TMASNL
|
| Detection Method: |  |
| Confidence: | 96.626727 |
| Match: | 1gu8A_ |
| Description: | Sensory rhodopsin II |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| receptor activity | 5.1157224036515 | bayes_pls_golite062009 |
| transmembrane receptor activity | 4.85722830910254 | bayes_pls_golite062009 |
| signal transducer activity | 4.75286640345932 | bayes_pls_golite062009 |
| molecular transducer activity | 4.75286640345932 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 4.35314551656946 | bayes_pls_golite062009 |
| peptide receptor activity | 2.68526520969168 | bayes_pls_golite062009 |
| peptide receptor activity, G-protein coupled | 2.66975845749013 | bayes_pls_golite062009 |
| binding | 2.36534865182258 | bayes_pls_golite062009 |
| neurotransmitter receptor activity | 2.27610825294925 | bayes_pls_golite062009 |
| neurotransmitter binding | 2.21173097508311 | bayes_pls_golite062009 |
| peptide binding | 1.89527944834672 | bayes_pls_golite062009 |
| photoreceptor activity | 1.79236208142167 | bayes_pls_golite062009 |
| G-protein coupled photoreceptor activity | 1.68412761754563 | bayes_pls_golite062009 |
| neuropeptide receptor activity | 1.58990466088334 | bayes_pls_golite062009 |
| neuropeptide binding | 1.58990466088334 | bayes_pls_golite062009 |
| transcription regulator activity | 1.31009205588407 | bayes_pls_golite062009 |
| G-protein coupled amine receptor activity | 1.2298526499749 | bayes_pls_golite062009 |
| protein binding | 0.516440306486999 | bayes_pls_golite062009 |
| opioid receptor activity | 0.470988413972081 | bayes_pls_golite062009 |
|
Region A: Residues: [87-344] |
1 11 21 31 41 51
| | | | | |
1 GWIPVRAKYN HVQTSTQKEH PGYRQIFYAR YVGWFLAFPW PIIQMSLLGG TPLWQIAFNV 60
61 GMTEIFTVCW LIAACVHSTY KWGYYTIGIG AAIVVCISLM TTTFNLVKAR GKDVSNVFIT 120
121 FMSVIMFLWL IAYPTCFGIT DGGNVLQPDS ATIFYGIIDL LILSILPVLF MPLANYLGIE 180
181 RLGLIFDEEP AEHVGPVAEK KMPSPASFKS SDSDSSIKEK LKLKKKHKKD KKKAKKAKKA 240
241 KKAKKAQEEE EDVATDSE
|
| Detection Method: | |
| Confidence: | 96.626727 |
| Match: | 1gu8A_ |
| Description: | Sensory rhodopsin II |
| Matching Structure (courtesy of the PDB): |
|
