Protein: | SCO2 |
Organism: | Saccharomyces cerevisiae |
Length: | 301 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCO2.
Description | E-value | Query Range |
Subject Range |
|
3.0E-75 | [1..301] | [1..301] |
|
4.0E-57 | [10..281] | [4..273] |
|
2.0E-54 | [109..296] | [1..179] |
|
2.0E-54 | [113..295] | [1..174] |
|
3.0E-54 | [55..295] | [17..234] |
|
4.0E-54 | [109..296] | [1..179] |
|
6.0E-54 | [63..295] | [10..233] |
|
7.0E-54 | [116..295] | [6..176] |
|
8.0E-54 | [118..295] | [8..176] |
Region A: Residues: [1-109] |
1 11 21 31 41 51 | | | | | | 1 MLNSSRKYAC RSLFRQANVS IKGLFYNGGA YRRGFSTGCC LRSDNKESPS ARQPLDRLQL 60 61 GDEINEPEPI RTRFFQFSRW KATIALLLLS GGTYAYLSRK RRLLETEKE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [110-301] |
1 11 21 31 41 51 | | | | | | 1 ADANRAYGSV ALGGPFNLTD FNGKPFTEEN LKGKFSILYF GFSHCPDICP EELDRLTYWI 60 61 SELDDKDHIK IQPLFISCDP ARDTPDVLKE YLSDFHPAII GLTGTYDQVK SVCKKYKVYF 120 121 STPRDVKPNQ DYLVDHSIFF YLIDPEGQFI DALGRNYDEQ SGLEKIREQI QAYVPKEERE 180 181 RRSKKWYSFI FN |
Detection Method: | |
Confidence: | 54.0 |
Match: | 1qq2A_ |
Description: | Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin) |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
antioxidant activity | 3.8464796631544 | bayes_pls_golite062009 |
oxidoreductase activity, acting on peroxide as acceptor | 3.44705858438242 | bayes_pls_golite062009 |
peroxidase activity | 3.44705858438242 | bayes_pls_golite062009 |
oxidoreductase activity | 2.31714727285588 | bayes_pls_golite062009 |
oxidoreductase activity, acting on sulfur group of donors | 2.23310780102446 | bayes_pls_golite062009 |
peroxiredoxin activity | 2.12777217096121 | bayes_pls_golite062009 |
glutathione peroxidase activity | 2.012364779649 | bayes_pls_golite062009 |
thioredoxin peroxidase activity | 1.96134566495756 | bayes_pls_golite062009 |
NADH dehydrogenase activity | 1.58488640079086 | bayes_pls_golite062009 |
NADH dehydrogenase (ubiquinone) activity | 1.42158072441985 | bayes_pls_golite062009 |
disulfide oxidoreductase activity | 1.32811008894503 | bayes_pls_golite062009 |
NADH dehydrogenase (quinone) activity | 1.29215364159258 | bayes_pls_golite062009 |
glutathione transferase activity | 1.17103672502279 | bayes_pls_golite062009 |
oxidoreductase activity, acting on NADH or NADPH | 0.98873267176254 | bayes_pls_golite062009 |
copper ion binding | 0.727599469956102 | bayes_pls_golite062009 |
binding | 0.680816432660797 | bayes_pls_golite062009 |
catalytic activity | 0.672192331361968 | bayes_pls_golite062009 |
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor | 0.669808779454721 | bayes_pls_golite062009 |
copper chaperone activity | 0.442181439383149 | bayes_pls_golite062009 |
protein binding | 0.341730456502484 | bayes_pls_golite062009 |
hydrolase activity | 0.245867695453855 | bayes_pls_golite062009 |
protein disulfide oxidoreductase activity | 0.0719543694089202 | bayes_pls_golite062009 |