| Protein: | COQ1 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 473 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COQ1.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..473] | [1..473] |
|
|
3.0E-83 | [37..432] | [20..365] |
|
|
2.0E-81 | [42..432] | [2..354] |
|
|
1.0E-80 | [32..432] | [20..368] |
|
|
3.0E-78 | [22..431] | [18..379] |
|
|
1.0E-77 | [37..432] | [20..367] |
|
|
1.0E-76 | [32..431] | [18..362] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MFQRSGAAHH IKLISSRRCR FKSSFAVALN AASKLVTPKI LWNNPISLVS KEMNTLAKNI 60
61 VALIGSGHPV LNKVTSYYFE TEGKKVRPLL VLLLSRALSE I
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [102-295] |
1 11 21 31 41 51
| | | | | |
1 PMTERNHLKI DKSDVPEDPI YSKPSQNQLF QRPASSISPL HILHGIKPLN PLTKGPEPLP 60
61 EETFDKQRGI LPKQRRLAEI VEMIHTASLL HDDVIDHSDT RRGRPSGNAA FTNKMAVLAG 120
121 DFLLGRATVS ISRLHNPEVV ELMSNSIANL VEGEFMQLKN TSIDADIDTI ENGHKLLPVP 180
181 SKKLEVKEHD FRVP
|
|
Region B: Residues: [321-346] |
1 11 21 31 41 51
| | | | | |
1 YLKTAALISK SCRCAAILSG ASPAVI
|
| Detection Method: | |
| Confidence: | 67.39794 |
| Match: | 1ubx__ |
| Description: | Farnesyl diphosphate synthase |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [296-320] |
1 11 21 31 41 51
| | | | | |
1 SRQQGLQLSH DQIIETAFEY YIHKT
|
|
Region B: Residues: [347-473] |
1 11 21 31 41 51
| | | | | |
1 DECYDFGRNL GICFQLVDDM LDFTVSGKDL GKPSGADLKL GIATAPVLFA WKEDPSLGPL 60
61 ISRNFSERGD VEKTIDSVRL HNGIAKTKIL AEEYRDKALQ NLRDSLPESD ARSALEFLTN 120
121 SILTRRK
|
| Detection Method: | |
| Confidence: | 67.39794 |
| Match: | 1ubx__ |
| Description: | Farnesyl diphosphate synthase |
| Matching Structure (courtesy of the PDB): |
|
