YRC Public Data Repository - Protein Structure Prediction

Protein:	YBL112C, YHR218W-A
Organism:	Saccharomyces cerevisiae
Length:	105 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBL112C, YHR218W-A.

Description	E-value	Query Range	Subject Range
YH218_YEAST, YB1... - Putative uncharacterized helicase-like protein YHR218W-A OS=Saccharomyces cerevisiae (strain ATCC 20... YBL112C, YHR218W-A - Putative protein of unknown function; YBL112C is contained within TEL02L, [DUBIOUS] Dubious open rea...	4.0E-51	[1..105]	[1..105]
gi\|7507776 - gi\|7507776\|pir\|\|T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans	2.0E-48	[1..91]	[710..800]

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Predicted Domain #1

Region A:
Residues: [1-105]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVLIGTKLV TEGIDIKQLM MVIMLDNRLN IIELIQGVGR LRDGGLCYLL SRKNSWAARN  60
   61 RKGELPPIKE GCITEQVREF YGLESKKGKK GPACWMLWLQ DRPVC

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Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits