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View Structure Prediction Details

Protein: YBL112C, YHR218W-A
Organism: Saccharomyces cerevisiae
Length: 105 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YBL112C, YHR218W-A.

Description E-value Query
Range
Subject
Range
YH218_YEAST, YB1... - Putative uncharacterized helicase-like protein YHR218W-A OS=Saccharomyces cerevisiae (strain ATCC 20...
YBL112C, YHR218W-A - Putative protein of unknown function; YBL112C is contained within TEL02L, [DUBIOUS] Dubious open rea...
4.0E-51 [1..105] [1..105]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
2.0E-48 [1..91] [710..800]

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Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVLIGTKLV TEGIDIKQLM MVIMLDNRLN IIELIQGVGR LRDGGLCYLL SRKNSWAARN  60
   61 RKGELPPIKE GCITEQVREF YGLESKKGKK GPACWMLWLQ DRPVC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.387 d.45.1 ClpS-like
View Download 0.367 d.16.1 FAD-linked reductases, C-terminal domain
View Download 0.344 a.4.3 ARID-like
View Download 0.317 a.118.8 TPR-like
View Download 0.311 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.301 c.49.1 Pyruvate kinase, C-terminal domain
View Download 0.297 d.58.18 Regulatory domain in the aminoacid metabolism
View Download 0.280 a.133.1 Phospholipase A2, PLA2
View Download 0.241 a.24.9 alpha-catenin/vinculin
View Download 0.228 a.57.1 Protein HNS-dependent expression A; HdeA
View Download 0.213 a.4.5 "Winged helix" DNA-binding domain
View Download 0.210 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.207 a.4.1 Homeodomain-like
View Download 0.204 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle