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View Structure Prediction Details

Protein: YAL018C
Organism: Saccharomyces cerevisiae
Length: 325 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAL018C.

Description E-value Query
Range
Subject
Range
gi|207347992 - gi|207347992|gb|EDZ73986.1| YAL018Cp-like protein [Saccharomyces cerevisiae AWRI1631]
LDS1_YEAST - Outer spore wall protein LDS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LDS1 PE=1 ...
YAL018C - Putative protein of unknown function
0.0 [1..325] [1..325]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-49 [116..294] [2..191]

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Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFTGSLALA GIGGLVYKFG GGQSYEKLPY VNIPFNQYLD KVYKKHFSKV MSRTRYVLMN  60
   61 FFKDAFTGGA FMYPFKGFLE FNTNKSSYST TMLGILSSYL IMFALVSFVY WATITPMYTA 120
  121 FLIVLGPIGL FIAIFHSFLQ ANVFTLLFMR LSHFNNHLVE VCLEKNGLEE NLSEVKPIKY 180
  181 YAPIN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [186-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIYFWAYYFP FKLVKYMLGL SVLFVLLVIS FFPLIGPILF HILISPFITQ IYFTKVLRLQ  60
   61 NFDNIQRREN IYLHAGQYAS FGFLAGLIES VPILAGFAIS TNTIGSVLFN LDHPMVPENL 120
  121 VETQAEIEAA PQDINQQPNQ 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle