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View Structure Prediction Details

Protein: YAL018C
Organism: Saccharomyces cerevisiae
Length: 325 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YAL018C.

Description E-value Query
Range
Subject
Range
gi|207347992 - gi|207347992|gb|EDZ73986.1| YAL018Cp-like protein [Saccharomyces cerevisiae AWRI1631]
LDS1_YEAST - Outer spore wall protein LDS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=LDS1 PE=1 ...
YAL018C - Putative protein of unknown function
0.0 [1..325] [1..325]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-49 [116..294] [2..191]

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Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFTGSLALA GIGGLVYKFG GGQSYEKLPY VNIPFNQYLD KVYKKHFSKV MSRTRYVLMN  60
   61 FFKDAFTGGA FMYPFKGFLE FNTNKSSYST TMLGILSSYL IMFALVSFVY WATITPMYTA 120
  121 FLIVLGPIGL FIAIFHSFLQ ANVFTLLFMR LSHFNNHLVE VCLEKNGLEE NLSEVKPIKY 180
  181 YAPIN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [186-325]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SIYFWAYYFP FKLVKYMLGL SVLFVLLVIS FFPLIGPILF HILISPFITQ IYFTKVLRLQ  60
   61 NFDNIQRREN IYLHAGQYAS FGFLAGLIES VPILAGFAIS TNTIGSVLFN LDHPMVPENL 120
  121 VETQAEIEAA PQDINQQPNQ 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.417 N/A N/A a.90.1 Transcription factor STAT-4 N-domain
View Download 0.417 N/A N/A a.90.1 Transcription factor STAT-4 N-domain
View Download 0.398 N/A N/A a.1.1 Globin-like
View Download 0.398 N/A N/A a.1.1 Globin-like
View Download 0.387 N/A N/A f.13.1 Family A G protein-coupled receptor-like
View Download 0.387 N/A N/A f.13.1 Family A G protein-coupled receptor-like
View Download 0.316 N/A N/A a.90.1 Transcription factor STAT-4 N-domain
View Download 0.312 N/A N/A a.24.1 Apolipoprotein
View Download 0.312 N/A N/A a.24.1 Apolipoprotein
View Download 0.274 N/A N/A c.84.1 Phosphoglucomutase, first 3 domains
View Download 0.269 N/A N/A a.87.1 DBL homology domain (DH-domain)
View Download 0.263 N/A N/A a.142.1 PTS-regulatory domain, PRD
View Download 0.256 N/A N/A a.4.12 TrpR-like
View Download 0.243 N/A N/A c.25.1 Ferredoxin reductase-like, C-terminal NADP-linked domain
View Download 0.243 N/A N/A d.198.2 Arp2/3 complex subunits
View Download 0.239 N/A N/A a.29.2 Bromodomain
View Download 0.231 N/A N/A d.224.1 SufE-like
View Download 0.231 N/A N/A d.19.1 MHC antigen-recognition domain
View Download 0.225 N/A N/A a.25.1 Ferritin-like
View Download 0.225 N/A N/A a.74.1 Cyclin-like
View Download 0.224 N/A N/A a.96.1 DNA-glycosylase
View Download 0.221 N/A N/A a.78.1 Fatty acid responsive transcription factor FadR, C-terminal domain
View Download 0.220 N/A N/A a.39.1 EF-hand
View Download 0.219 N/A N/A a.48.2 Transferrin receptor ectodomain, C-terminal domain
View Download 0.217 N/A N/A a.1.1 Globin-like
View Download 0.216 N/A N/A a.26.1 4-helical cytokines
View Download 0.212 N/A N/A a.126.1 Serum albumin-like
View Download 0.209 N/A N/A f.17.2 Cytochrome c oxidase subunit II-like, transmembrane region


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle