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View Structure Prediction Details

Protein: CheB53a-PA
Organism: Drosophila melanogaster
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CheB53a-PA.

Description E-value Query
Range
Subject
Range
CheB38c-PA - The gene Chemosensory protein B 38c is referred to in FlyBase by the symbol Dmel\CheB38c (CG14405, F...
282.0 [0..4] [196..6]

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Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLELILILNV VHLSLQISYE FEIEDESIYS DCSDVPPGTL NISGLFDLTN YTTTITADGL  60
   61 SVSGNMTSVF NAQPTDRIEL TGNLLFFDRG AWQPTTLNMM VRDFCAVMYD KKQLWYTDWS 120
  121 SHVVNRDEIK DNCIKVPGTL FLIESYNMKL VFGSGIPLGT GRYSIRVQVF AYDQKGKKRP 180
  181 NNVCYEVKGN FYKESNICIS KPILITINVL AESLKSQMSS TNHANI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.96
Match: 1pu5A
Description: GM2-activator Protein crystal structure
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.150611973436827 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle