YRC Public Data Repository - Protein Structure Prediction

Protein:	Y614_CAMJR
Organism:	Campylobacter jejuni RM1221
Length:	183 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y614_CAMJR.

Description	E-value	Query Range	Subject Range
gi\|606188\|gb\|AAA... - ORF_f217; orfE of ECMRED, uses 2nd start [Escherichia coli] gi\|606188 - gi\|606188\|gb\|AAA58051.1\| ORF_f217; orfE of ECMRED, uses 2nd start [Escherichia coli]	246.0	[0..2]	[183..24]
MAF_BACHD - Septum formation protein Maf OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / J... MAF_BACHD - Septum formation protein Maf OS=Bacillus halodurans GN=maf PE=3 SV=1	246.0	[0..2]	[183..4]
gi\|238860385, gi... - gi\|238902348\|ref\|YP_002928144.1\| hypothetical protein BWG_2948 [Escherichia coli BW2952], gi\|2388603... gi\|242378783, gi... - gi\|251786510\|ref\|YP_003000814.1\| hypothetical protein B21_03058 [Escherichia coli BL21], gi\|24237878... gi\|253979241, gi... - gi\|254289934\|ref\|YP_003055682.1\| Maf-like protein [Escherichia coli BL21(DE3)], gi\|253979241\|gb\|ACT4... gi\|226840031, gi... - gi\|254038407\|ref\|ZP_04872465.1\| septum formation protein Maf [Escherichia sp. 1_1_43], gi\|226840031\|... gi\|253975085, gi... - gi\|254163184\|ref\|YP_003046292.1\| Maf-like protein [Escherichia coli B str. REL606], gi\|253975085\|gb\|... gi\|124500544, gi... - gi\|124528521\|ref\|ZP_01699810.1\| maf protein [Escherichia coli B], gi\|124500544\|gb\|EAY48016.1\| maf pr... gi\|157162725, gi... - gi\|75197190\|ref\|ZP_00707260.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... gi\|170018509, gi... - gi\|170018509\|ref\|YP_001723463.1\| Maf-like protein [Escherichia coli ATCC 8739], gi\|169753437\|gb\|ACA7... gi\|89110009, gi\|... - gi\|89110009\|ref\|AP_003789.1\| hypothetical protein [Escherichia coli str. K-12 substr. W3110], gi\|856... gi\|170082778, gi... - gi\|170082778\|ref\|YP_001732098.1\| hypothetical protein ECDH10B_3424 [Escherichia coli str. K-12 subst... YHDE_ECOLI - Maf-like protein yhdE - Escherichia coli EG11298 - dTTP /UTP pyrophosphatase; m(5)UTP /m(5)CTP /pseudo-UTP pyrophosphatase / dTTP /UTP pyrophosphatase; m(5... gi\|194421903, gi... - gi\|83585382\|ref\|ZP_00924028.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... EG11298 - dTTP /UTP pyrophosphatase; m(5)UTP /m(5)CTP /pseudo-UTP pyrophosphatase / dTTP /UTP pyrophosphatase; m(5...	246.0	[0..2]	[183..4]
gi\|75234845, gi\|... - gi\|75234845\|ref\|ZP_00719136.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... gi\|190901781, gi... - gi\|75228627\|ref\|ZP_00715252.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... gi\|194429087, gi... - gi\|75209684\|ref\|ZP_00709896.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... gi\|157080403, gi... - gi\|75188047\|ref\|ZP_00701314.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... gi\|218555811, gi... - gi\|218555811\|ref\|YP_002388724.1\| Maf-like protein [Escherichia coli IAI1], gi\|218362579\|emb\|CAR00203... YCEF2_SHISS - Maf-like protein YceF 2 OS=Shigella sonnei (strain Ss046) GN=yceF2 PE=3 SV=1 gi\|218353678, gi... - gi\|218696946\|ref\|YP_002404613.1\| Maf-like protein [Escherichia coli 55989], gi\|218353678\|emb\|CAU9992... gi\|75511856, gi\|... - gi\|75511856\|ref\|ZP_00734468.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... gi\|75256617, gi\|... - gi\|75256617\|ref\|ZP_00728247.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... gi\|209920718, gi... - gi\|209920718\|ref\|YP_002294802.1\| Maf-like protein [Escherichia coli SE11], gi\|209913977\|dbj\|BAG79051...	246.0	[0..2]	[183..4]
gi\|187734051, gi... - gi\|75178757\|ref\|ZP_00698793.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu...	245.0	[0..2]	[183..4]
gi\|197095705, gi... - gi\|197364228\|ref\|YP_002143865.1\| Maf-like protein [Salmonella enterica subsp. enterica serovar Parat... gi\|194448818, gi... - gi\|194448818\|ref\|YP_002047399.1\| Maf-like protein [Salmonella enterica subsp. enterica serovar Heide... gi\|205336193, gi... - gi\|205336193\|gb\|EDZ22957.1\| septum formation protein Maf [Salmonella enterica subsp. enterica serova... YCEF2_SALPA - Maf-like protein YceF 2 OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=yceF2 PE=3 SV=1 YCEF2_SALPA - Maf-like protein yceF 2 OS=Salmonella paratyphi A GN=yceF2 PE=3 SV=1	245.0	[0..2]	[183..4]
YHDE_ECOL6 - Maf-like protein YhdE OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=yhdE PE=3 SV... gi\|227835358, gi... - gi\|227887962\|ref\|ZP_04005767.1\| nucleotide binding protein [Escherichia coli 83972], gi\|227835358\|gb... gi\|237706006, gi... - gi\|237706006\|ref\|ZP_04536487.1\| maf-like protein yceF 2 [Escherichia sp. 3_2_53FAA], gi\|226899046\|gb... YCEF2_ECOUT - Maf-like protein YceF 2 OS=Escherichia coli (strain UTI89 / UPEC) GN=yceF2 PE=3 SV=1 gi\|117625531, gi... - gi\|117625531\|ref\|YP_858854.1\| Maf-like protein [Escherichia coli APEC O1], gi\|115514655\|gb\|ABJ02730.... YCEF2_ECOL5 - Maf-like protein YceF 2 OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=yceF2 PE=3 SV=1 gi\|75237898, gi\|... - gi\|75237898\|ref\|ZP_00721909.1\| COG0424: Nucleotide-binding protein implicated in inhibition of septu... YHDE_ECOL6 - Maf-like protein yhdE OS=Escherichia coli O6 GN=yhdE PE=3 SV=1 gi\|218560309, gi... - gi\|218560309\|ref\|YP_002393222.1\| Maf-like protein [Escherichia coli S88], gi\|218367078\|emb\|CAR04849.... gi\|215488556, gi... - gi\|215488556\|ref\|YP_002330987.1\| Maf-like protein [Escherichia coli O127:H6 str. E2348/69], gi\|21526... gi\|218691529, gi... - gi\|218691529\|ref\|YP_002399741.1\| Maf-like protein [Escherichia coli ED1a], gi\|218429093\|emb\|CAR09900...	244.0	[0..2]	[183..4]
YCEF_SHIDS - Maf-like protein YceF OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=yceF PE=3 SV=1	244.0	[0..2]	[183..4]
gi\|197263788, gi... - gi\|197263788\|ref\|ZP_03163862.1\| septum formation protein Maf [Salmonella enterica subsp. enterica se... gi\|199604173, gi... - gi\|200387075\|ref\|ZP_03213687.1\| septum formation protein Maf [Salmonella enterica subsp. enterica se... gi\|204319940, gi... - gi\|204931173\|ref\|ZP_03221967.1\| septum formation protein Maf [Salmonella enterica subsp. enterica se... gi\|224469696, gi... - gi\|224585168\|ref\|YP_002638967.1\| Maf-like protein [Salmonella enterica subsp. enterica serovar Parat... gi\|194446465, gi... - gi\|194446465\|ref\|YP_002042626.1\| septum formation protein Maf [Salmonella enterica subsp. enterica s... gi\|194468880, gi... - gi\|194468880\|ref\|ZP_03074864.1\| septum formation protein Maf [Salmonella enterica subsp. enterica se... YCEF2_SALCH - Maf-like protein yceF 2 OS=Salmonella choleraesuis GN=yceF2 PE=3 SV=1 gi\|194709425, gi... - gi\|194733923\|ref\|YP_002116319.1\| septum formation protein Maf [Salmonella enterica subsp. enterica s... gi\|197250705, gi... - gi\|197250705\|ref\|YP_002148295.1\| septum formation protein Maf [Salmonella enterica subsp. enterica s... gi\|205332049, gi... - gi\|205332049\|gb\|EDZ18813.1\| septum formation protein Maf [Salmonella enterica subsp. enterica serova... gi\|197287874, gi... - gi\|197287874\|gb\|EDY27262.1\| septum formation protein Maf [Salmonella enterica subsp. enterica serova... gi\|205348377, gi... - gi\|205348377\|gb\|EDZ35008.1\| septum formation protein Maf [Salmonella enterica subsp. enterica serova... YCEF2_SALCH - Maf-like protein YceF 2 OS=Salmonella choleraesuis (strain SC-B67) GN=yceF2 PE=3 SV=1 gi\|205340895, gi... - gi\|205340895\|gb\|EDZ27659.1\| septum formation protein Maf [Salmonella enterica subsp. enterica serova... YCEF2_SALCH - Maf-like protein yceF 2 OS=Salmonella choleraesuis GN=yceF2 PE=3 SV=1 YHDE_SALTY - Maf-like protein YhdE OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=yhdE PE=3 S... gi\|205328114, gi... - gi\|205328114\|gb\|EDZ14878.1\| septum formation protein Maf [Salmonella enterica subsp. enterica serova... YHDE_SALTY - Maf-like protein yhdE OS=Salmonella typhimurium GN=yhdE PE=3 SV=1 YHDE_SALTY - Maf-like protein yhdE OS=Salmonella typhimurium GN=yhdE PE=3 SV=1 gi\|238913549 - gi\|238913549\|ref\|ZP_04657386.1\| Maf-like protein [Salmonella enterica subsp. enterica serovar Tennes... lcl\|NC_016856.1_... - [gene=maf_2] [protein=Maf-like protein] [protein_id=YP_005239557.1] [location=complement(3555205..35...	244.0	[0..2]	[183..4]
gi\|12517871, gi\|... - gi\|15803781\|ref\|NP_289815.1\| Maf-like protein [Escherichia coli O157:H7 EDL933], gi\|12517871\|gb\|AAG5... YHDE_ECO57 - Maf-like protein YhdE OS=Escherichia coli O157:H7 GN=yhdE PE=3 SV=1 gi\|217327400, gi... - gi\|217327400\|ref\|ZP_03443483.1\| septum formation protein Maf [Escherichia coli O157:H7 str. TW14588]... gi\|189373952, gi... - gi\|189373952\|gb\|EDU92368.1\| septum formation protein Maf [Escherichia coli O157:H7 str. EC869], gi\|1... gi\|168763784, gi... - gi\|189366149\|gb\|EDU84565.1\| septum formation protein Maf [Escherichia coli O157:H7 str. EC4501], gi\|... gi\|25325511, gi\|... - pir\|\|C85989 hypothetical protein yhdE [imported] - Escherichia coli (strain O157:H7, substrain EDL9... gi\|13363593, gi\|... - gi\|15833374\|ref\|NP_312147.1\| Maf-like protein [Escherichia coli O157:H7 str. Sakai], gi\|13363593\|dbj...	244.0	[0..2]	[183..4]

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Predicted Domain #1

Region A:
Residues: [1-183]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLILASSSIS RANLLKTAKI DFRQVSFDYD ENLNKNISPF LYVQKIVLEK ERQFLSTLGK  60
   61 DFQNQNLLFA DSIVCIDEKI LTKAKDKKEA YEMLALQNGK YASILSAFLL VKPEKRVFSL 120
  121 SKTTLYFKNF DENALRDYVE NDLYKGKAGC IMCEGFHQNF ITQQVGNLST ALGLDIQTLK 180
  181 AYL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	63.69897
Match:	1ex2A
Description:	Maf protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	1.08794538361271	bayes_pls_golite062009
protein binding	0.58174422908495	bayes_pls_golite062009
pyrophosphatase activity	0.442220291187313	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.422005572981264	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.421915415135494	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: