| Protein: | gi|208968253, gi... |
| Organism: | synthetic construct |
| Length: | 264 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|208968253, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
3.0E-59 | [1..248] | [1..248] |
|
|
3.0E-58 | [1..249] | [1..249] |
|
|
4.0E-58 | [1..249] | [1..249] |
|
|
1.0E-57 | [1..249] | [1..249] |
|
|
4.0E-57 | [3..249] | [45..289] |
|
|
1.0E-56 | [1..251] | [1..250] |
|
|
6.0E-54 | [1..256] | [136..389] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MESGKTASPK SMPKDAQMMA QILKDMGITE YEPRVINQML EFAFRYVTTI LDDAKIYSSH 60
61 AKKATVDADD VRLAIQCRAD QSFTSPPPRD FLLDIARQRN QTPL
|
| Detection Method: |  |
| Confidence: | 26.09691 |
| Match: | 1tafA |
| Description: | TAF(II)42 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 9.25279783093877 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 5.97252613675094 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 5.97252613675094 | bayes_pls_golite062009 |
| N-acetyltransferase activity | 4.49886535711761 | bayes_pls_golite062009 |
| DNA binding | 4.49118409263799 | bayes_pls_golite062009 |
| nucleic acid binding | 4.35201412176948 | bayes_pls_golite062009 |
| N-acyltransferase activity | 4.22222466548509 | bayes_pls_golite062009 |
| transcription regulator activity | 4.08606081850613 | bayes_pls_golite062009 |
| transcription initiation factor activity | 3.96621818094279 | bayes_pls_golite062009 |
| acetyltransferase activity | 3.91614625961398 | bayes_pls_golite062009 |
| acyltransferase activity | 3.38611688546892 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 3.35015681315177 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 3.28941584139552 | bayes_pls_golite062009 |
| binding | 3.27510691458843 | bayes_pls_golite062009 |
| transferase activity, transferring acyl groups | 3.1782337747057 | bayes_pls_golite062009 |
| transcription factor activity | 2.51581622888695 | bayes_pls_golite062009 |
| protein binding | 2.1291876005999 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.82448881874976 | bayes_pls_golite062009 |
| transcription activator activity | 1.25487495162413 | bayes_pls_golite062009 |
| transcription factor binding | 1.15204005455906 | bayes_pls_golite062009 |
| transcription coactivator activity | 1.1297723528047 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.10331930589736 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.01502031330902 | bayes_pls_golite062009 |
| transcription repressor activity | 0.72554769377984 | bayes_pls_golite062009 |
| histone binding | 0.218942897869955 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0852726470007639 | bayes_pls_golite062009 |
| transcription corepressor activity | 0.0736756545988504 | bayes_pls_golite062009 |
|
Region A: Residues: [105-264] |
1 11 21 31 41 51
| | | | | |
1 PLIKPYSGPR LPPDRYCLTA PNYRLKSLQK KASTSAGRIT VPRLSVGSVT SRPSTPTLGT 60
61 PTPQTMSVST KVGTPMSLTG QRFTVQMPTS QSPAVKASIP ATSAVQNVLI NPSLIGSKNI 120
121 LITTNMMSSQ NTANESSNAL KRKREDDDDD DDDDDDYDNL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
