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View Structure Prediction Details

Protein: YEX1_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 455 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YEX1_SCHPO.

Description E-value Query
Range
Subject
Range
gi|42547694, gi|... - gi|46111161|ref|XP_382638.1| hypothetical protein FG02462.1 [Gibberella zeae PH-1], gi|42547694|gb|E...
436.0 [0..5] [448..2]
gi|40741046, gi|... - gi|67903400|ref|XP_681956.1| hypothetical protein AN8687.2 [Aspergillus nidulans FGSC A4], ref|XP_41...
418.0 [0..5] [448..2]
gi|85091868 - gi|85091868|ref|XP_959112.1| hypothetical protein NCU04855 [Neurospora crassa OR74A]
gi|28920512, gi|... - gi|32407254|ref|XP_324212.1| hypothetical protein [Neurospora crassa], gi|28920512|gb|EAA29876.1| co...
417.0 [0..5] [448..2]
TRIP4_MOUSE, TRI... - Activating signal cointegrator 1 OS=Mus musculus GN=Trip4 PE=1 SV=1, (Q9QXN3) Activating signal coin...
373.0 [0..4] [449..15]
gi|114657598 - gi|114657598|ref|XP_001174255.1| PREDICTED: thyroid hormone receptor interactor 4 isoform 2 [Pan tro...
373.0 [0..4] [389..15]
gi|38104840, gi|... - gi|39960266|ref|XP_364560.1| hypothetical protein MG09366.4 [Magnaporthe grisea 70-15], gb|EAA51349....
372.0 [0..8] [391..5]

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Predicted Domain #1
Region A:
Residues: [1-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKWTKENVL KILPVDDESA AMITSTALAV DSSEAAKDYW ISLLGDSAET IEFISDFNQK  60
   61 RFHSTHSGNS PSIMKNKKNV TPNNNIRQKN TATSSHPSFY IANNKQKGYD EEMYKVNPAS 120
  121 RNKSQSNNIS SHEKSSKTTK NVSPGVMTSD LIPEKKSVKH NNSSSNRIEG LADIEKAIRQ 180
  181 IEISQNINKA ERRVCNCQGR KHPLNEAAPN CLNCGKIICI VEGIGPCTFC DNPVISKAQQ 240
  241 LELIQELKHE GSRLKQAANQ KRKSKTVSSK NNFQRLQNSS LHSIFL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.22
Match: 1dvpA
Description: Hrs
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.823081305272688 bayes_pls_golite062009
protein binding 0.12136520713995 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [287-455]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPKQLEQKAQ EAEERKNVLL NFDRTSAQRT RIIDEAADFD PTSLASDTWA SPAEKALNLV  60
   61 RMQKAMAKKE KKKKKVLSIS LSGKKVVVDQ KEASSESSDE DQDELDNLTK VEGQSHSHNP 120
  121 KAPVIRNLPR PIYHQDLHSS HVAVPESILN KINQKWSKVQ DDDGMPSML

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle