YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: Myo95E-PI
Organism: Drosophila melanogaster
Length: 844 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Myo95E-PI.

Description E-value Query
Range
Subject
Range
gi|47940239 - gi|47940239|gb|AAH72094.1| LOC432141 protein [Xenopus laevis]
651.0 [0..1] [784..244]

Back

Predicted Domain #1
Region A:
Residues: [1-536]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESYLISKLI LREIQWECTL PITRITDPII GERNFHIFYQ LLLGADLQLL KSLKLYRNVE  60
   61 KYELLRNTTA MEEDRMNFHY TKRSLDVLGL SCEESNSIFR VIAVVLKLGN FIFVPITNID 120
  121 GTEGCQVSNV YEVQETAQLL NMEAQILINC LTRANSTNSA QEDVGCEMDA RQAATNRNTL 180
  181 CRTLYSRLFT WLVNKINESL KSTQREKNLA LLDFYGFEAL DHNSFEQFAI NYSAEKIHQN 240
  241 FVFHVLRSEQ ELYIREGLEW SRIDYFDNES ICELIDKPSY GILSLINEPH LNSNDALLLR 300
  301 VQQCCAGHPN FMTTGSNSMC FQIRHYASVV NYSIHRFLEK NSDMLPKYIS AAFYQSKLSL 360
  361 VQSLFPEGNP RRQVTKKPST LSSNIRTQLQ TLLAIVKHRR SHYVFCIKPN EGKQPHQFDM 420
  421 ALVQHQVRYM SLMPLVHLCR TGHCYHLLHV KFFHRYKLLN SLTWPHFHGG SQVEGIALII 480
  481 RNLPLPSAEF TIGTKNVFVR SPRTVYELEQ FRRLRISELA VLIQTMFRMY HARKRF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 137.0
Match: 1lkxA
Description: Myosin S1, motor domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.77927104644254 bayes_pls_golite062009
actin-dependent ATPase activity 1.24902799058407 bayes_pls_golite062009
motor activity 1.24134836429447 bayes_pls_golite062009
actin binding 0.787185996273667 bayes_pls_golite062009
microfilament motor activity 0.579837407295159 bayes_pls_golite062009
cytoskeletal protein binding 0.498311726132348 bayes_pls_golite062009
nucleoside-triphosphatase activity 0.398651949563863 bayes_pls_golite062009
pyrophosphatase activity 0.329606804913681 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.310343974731494 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.308125979591209 bayes_pls_golite062009
protein binding 0.193768631623192 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [537-596]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QRMRHSQMII SSAWRTWRAR EEYRSLKYKR QVRWAIDIIG RYYRQWKIRQ FLLTIPLRLP  60
   61 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [597-844]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNTLSPLSTE WPVAPAFLAD ASRHLRSIYH RWKCYIYRNS FDQTARNRMR EKVTASIIFK  60
   61 DRKASYGRSV GHPFVGDYVR LRHNQQWKKI CAETNDQYVV FADIINKIAR SSGKFVPILL 120
  121 VLSTSSLLLL DQRTLQIKYR VPASEIYRMS LSPYLDDIAV FHVKASEFGR KKGDFVFQTG 180
  181 HVIEIVTKMF LVIQNATGKP PEIHISTEFE ANFGQQTVIF SFKYGGMSDL AQGPPKVTRK 240
  241 ANRMEIIV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.522879
Match: 2tmaA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle