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View Structure Prediction Details

Protein: CE38440
Organism: Caenorhabditis elegans
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38440.

Description E-value Query
Range
Subject
Range
gi|73987794 - gi|73987794|ref|XP_858116.1| PREDICTED: similar to phosphatidylinositol-binding clathrin assembly pr...
310.0 [0..11] [332..24]

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Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRSLLRAQE EAVRKAITED EAPLKPKHSR TIIVGTHKAK SSEMFWNLLE SIQLEKHPVM  60
   61 TWKFCNLVHK LLQEGHSTVP QETYRHLNRF KQLAHYWIHR GSYGPCIQAY CQLLHDRVTF 120
  121 HHKHPFFPGN LDLTNSQMQI LQGNVVKMLE ITSDLMSQMD LLLVLQERVY EMINTRRWNS 180
  181 LIPQECMLLP LISVIQETSK ILNYIVHIMF KLHTAARCIG SISNILSQFQ HYHRIYQSLC 240
  241 GDQAGILLKK NQKRQVRRGW IQEKITRALN RIEQYENRLI QMHGEFEYAK READEHRKEV 300
  301 QRLRYELALR DASRNQNQAA LYDTPPDGFS NKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.522879
Match: 1hf8A
Description: Clathrin assembly lymphoid myeloid leukaemia protein, Calm
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.229007340928547 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle