| Protein: | pqn-27 |
| Organism: | Caenorhabditis elegans |
| Length: | 534 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pqn-27.
| Description | E-value | Query Range |
Subject Range |
|
|
415.0 | [0..102] | [506..56] |
|
Region A: Residues: [1-154] |
1 11 21 31 41 51
| | | | | |
1 MSGGNWQYNN WNRPGQPPAQ QNQDDLYQNP QAGYGYNNQQ QQQQGRPQQY AGYPPQRQQQ 60
61 QYNMNAYAPR QQQQQQYQQQ QQNYMMQHQQ QHQQQHHYHQ QQQQQFMFNA NANVFVPRGH 120
121 AQQPPAEYGF YNGPPVHQQH YQQQQQHYGA ATSA
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [155-424] |
1 11 21 31 41 51
| | | | | |
1 PSSSYNVMYQ QQEDTGIDAF AQFGQQSQQY HPSPELSEQI NASKCSPYLT EILVGCEQLI 60
61 AEGEEDSPTW ISAIRQRFED PQMDEVSKKI GVKLIIEMAF TMEPNQFRTA DPQNTFSNLL 120
121 KTLSYEVKDF LRVFIVPTLG EYHEGRKQLE NDSRVYMAVF YAEVFVKLTL DNGSRFDKIG 180
181 AALADQIEEI LKFQPKDEYM KCLLRAFKVA GAELDTSEDL KLRADHILTI MGGYAKGSPL 240
241 LGDSVKAQIF SLIECRTRGW DRAAARGPVR
|
| Detection Method: | |
| Confidence: | 69.69897 |
| Match: | 1hu3A |
| Description: | Eukaryotic initiation factor eIF4G |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.29040336175225 | bayes_pls_golite062009 |
| protein binding | 1.041337870941 | bayes_pls_golite062009 |
|
Region A: Residues: [425-534] |
1 11 21 31 41 51
| | | | | |
1 SSAGAGGGGG CVADRGEHDS SFDDSTDNDL TEEERQFLES HLEQVESRRG AEEDYDEQEM 60
61 MKEFGKFVKE ELQQAELKST SEMLQKLEIE KDTAGAATET DETTPKTEEK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
