| Protein: | AGL27_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 196 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL27_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
203.0 | [0..1] | [196..1] |
|
Region A: Residues: [1-106] |
1 11 21 31 41 51
| | | | | |
1 MGRRKIEIKR IENKSSRQVT FSKRRNGLID KARQLSILCE SSVAVVVVSA SGKLYDSSSG 60
61 DDISKIIDRY EIQHADELRA LDLEEKIQNY LPHKELLETV QSKLEE
|
| Detection Method: |  |
| Confidence: | 18.154902 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.0368771990474 | bayes_pls_golite062009 |
|
Region A: Residues: [107-196] |
1 11 21 31 41 51
| | | | | |
1 PNVDNVSVDS LISLEEQLET ALSVSRARKA ELMMEYIESL KEKEKLLREE NQVLASQMGK 60
61 NTLLATDDER GMFPGSSSGN KIPETLPLLN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.454 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.451 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.447 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.414 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.371 | N/A | N/A | a.7.1 | Spectrin repeat |
