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View Structure Prediction Details

Protein: BGAL_ECOLI
Organism: Escherichia coli
Length: 1024 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BGAL_ECOLI.

Description E-value Query
Range		 Subject
Range
gi|57157820 - gi|57157820|dbj|BAD83864.1| fusion protein [Eukaryotic vector pSV-ssTMbgyg]
 1118.0 [0..9] [1023..265]
gi|57157779 - gi|57157779|dbj|BAD83862.1| fusion protein [Retroviral signal sequence gene trap vector prvSStrap]
gi|57157781 - gi|57157781|dbj|BAD83863.1| fusion protein [Signal sequence gene trap vector pSA-TMbgyg]
 1116.0 [0..9] [1023..239]
gi|453624 - gi|453624|emb|CAA54105.1| lacZ neomycin phosphotransferase fusion protein [synthetic construct]
 1103.0 [0..9] [1024..32]
gi|29421420 - gi|29421420|gb|AAO48720.1| LacZ [CRIM plasmid pLA1]
gi|5668897 - gi|5668897|gb|AAD46057.1|AF076213_2 beta-d-galactosidase [Promoter screenings vector pMM225]
gi|5668891 - gi|5668891|gb|AAD46052.1|AF076212_2 beta-d-galactosidase [Promoter screenings vector pMM223]
gi|29414408 - gi|29414408|gb|AAO12738.1| beta-galactosidase [CRIM plasmid pLA5]
gi|29414128 - gi|29414128|gb|AAO12736.1| beta-galactosidase [CRIM plasmid pLA4]
gi|16209198 - gi|16209198|gb|AAL09171.1| beta-galactosidase [CRIM plasmid pLA2]
gi|16209195 - gi|16209195|gb|AAL09169.1| lacZ [CRIM plasmid pAH125]
gi|29415049 - gi|29415049|gb|AAO12746.1| beta-galactosidase [CRIM plasmid pLZ31]
gi|29415028 - gi|29415028|gb|AAO12744.1| beta-galactosidase [CRIM plasmid pLA9]
gi|29414919 - gi|29414919|gb|AAO12742.1| beta-galactosidase [CRIM plasmid pLA8]
gi|29414665 - gi|29414665|gb|AAO12740.1| beta-galactosidase [CRIM plasmid pLA7]
 1098.0 [0..1] [1024..1]
BGAL_ECO24 - Beta-galactosidase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=lacZ PE=3 SV=1
 1096.0 [0..1] [1024..1]
BGAL_ECOLX - Beta-galactosidase OS=Escherichia coli GN=lacZ PE=3 SV=1
 1096.0 [0..1] [1024..1]
BGAL_ECOHS - Beta-galactosidase OS=Escherichia coli O9:H4 (strain HS) GN=lacZ PE=3 SV=1
 1095.0 [0..1] [1024..1]
gi|17473495 - gi|17473495|gb|AAL38391.1| beta-galactosidase [Cloning vector pCE37]
gi|37780057 - gi|37780057|gb|AAP31128.1| beta-galactosidase [synthetic construct]
gi|17473487 - gi|17473487|gb|AAL38385.1| beta-galactosidase [Cloning vector pCE26]
gi|17473491 - gi|17473491|gb|AAL38388.1| beta-galactosidase [Cloning vector pCE36]
 1095.0 [0..3] [1024..1]

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Predicted Domain #1
Region A:
Residues: [1-1024] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTMITDSLAV VLQRRDWENP GVTQLNRLAA HPPFASWRNS EEARTDRPSQ QLRSLNGEWR  60
   61 FAWFPAPEAV PESWLECDLP EADTVVVPSN WQMHGYDAPI YTNVTYPITV NPPFVPTENP 120
  121 TGCYSLTFNV DESWLQEGQT RIIFDGVNSA FHLWCNGRWV GYGQDSRLPS EFDLSAFLRA 180
  181 GENRLAVMVL RWSDGSYLED QDMWRMSGIF RDVSLLHKPT TQISDFHVAT RFNDDFSRAV 240
  241 LEAEVQMCGE LRDYLRVTVS LWQGETQVAS GTAPFGGEII DERGGYADRV TLRLNVENPK 300
  301 LWSAEIPNLY RAVVELHTAD GTLIEAEACD VGFREVRIEN GLLLLNGKPL LIRGVNRHEH 360
  361 HPLHGQVMDE QTMVQDILLM KQNNFNAVRC SHYPNHPLWY TLCDRYGLYV VDEANIETHG 420
  421 MVPMNRLTDD PRWLPAMSER VTRMVQRDRN HPSVIIWSLG NESGHGANHD ALYRWIKSVD 480
  481 PSRPVQYEGG GADTTATDII CPMYARVDED QPFPAVPKWS IKKWLSLPGE TRPLILCEYA 540
  541 HAMGNSLGGF AKYWQAFRQY PRLQGGFVWD WVDQSLIKYD ENGNPWSAYG GDFGDTPNDR 600
  601 QFCMNGLVFA DRTPHPALTE AKHQQQFFQF RLSGQTIEVT SEYLFRHSDN ELLHWMVALD 660
  661 GKPLASGEVP LDVAPQGKQL IELPELPQPE SAGQLWLTVR VVQPNATAWS EAGHISAWQQ 720
  721 WRLAENLSVT LPAASHAIPH LTTSEMDFCI ELGNKRWQFN RQSGFLSQMW IGDKKQLLTP 780
  781 LRDQFTRAPL DNDIGVSEAT RIDPNAWVER WKAAGHYQAE AALLQCTADT LADAVLITTA 840
  841 HAWQHQGKTL FISRKTYRID GSGQMAITVD VEVASDTPHP ARIGLNCQLA QVAERVNWLG 900
  901 LGPQENYPDR LTAACFDRWD LPLSDMYTPY VFPSENGLRC GTRELNYGPH QWRGDFQFNI 960
  961 SRYSQQQLME TSHRHLLHAE EGTWLNIDGF HMGIGGDDSW SPSVSAEFQL SAGRYHYQLV1020
 1021 WCQK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1bglA
Description: beta-Galactosidase, domains 2 and 4; beta-Galactosidase; beta-Galactosidase, domain 5; beta-Galactosidase, domain 3
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on glycosyl bonds 3.1190602686215 bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds 2.98773241907716 bayes_pls_golite062009
hydrolase activity 2.42454020062028 bayes_pls_golite062009
catalytic activity 2.22613067995402 bayes_pls_golite062009
alpha,alpha-phosphotrehalase activity 1.21971230909808 bayes_pls_golite062009
racemase and epimerase activity, acting on carbohydrates and derivatives 1.21567860634685 bayes_pls_golite062009
racemase and epimerase activity 1.19295069153058 bayes_pls_golite062009
trehalase activity 0.8585169360333 bayes_pls_golite062009
sucrose phosphorylase activity 0.67048515776965 bayes_pls_golite062009
glucosidase activity 0.58717079348538 bayes_pls_golite062009
hexosaminidase activity 0.16438321606077 bayes_pls_golite062009
amylase activity 0.0914002140078796 bayes_pls_golite062009
alpha-amylase activity 0.0521244165288097 bayes_pls_golite062009
chitinase activity 0.0382131529139698 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle