YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|2633252, gi|1...
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 496 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2633252, gi|1....

Description E-value Query
Range
Subject
Range
GLPK2_THEMA, GLK... - Glycerol kinase 2 OS=Thermotoga maritima GN=glpK2 PE=3 SV=2, (Q9X1E4) Glycerol kinase 2 (EC 2.7.1.30...
GLPK2_THEMA - Glycerol kinase 2 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=glpK2 ...
650.0 [0..3] [496..2]

Back

Predicted Domain #1
Region A:
Residues: [1-496]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METYILSLDQ GTTSSRAILF NKEGKIVHSA QKEFTQYFPH PGWVEHNANE IWGSVLAVIA  60
   61 SVISESGISA SQIAGIGITN QRETTVVWDK DTGSPVYNAI VWQSRQTSGI CEELREKGYN 120
  121 DKFREKTGLL IDPYFSGTKV KWILDNVEGA REKAEKGELL FGTIDTWLIW KMSGGKAHVT 180
  181 DYSNASRTLM FNIYDLKWDD QLLDILGVPK SMLPEVKPSS HVYAETVDYH FFGKNIPIAG 240
  241 AAGDQQSALF GQACFEEGMG KNTYGTGCFM LMNTGEKAIK SEHGLLTTIA WGIDGKVNYA 300
  301 LEGSIFVAGS AIQWLRDGLR MFQDSSLSES YAEKVDSTDG VYVVPAFVGL GTPYWDSDVR 360
  361 GSVFGLTRGT TKEHFIRATL ESLAYQTKDV LDAMEADSNI SLKTLRVDGG AVKNNFLMQF 420
  421 QGDLLNVPVE RPEINETTAL GAAYLAGIAV GFWKDRSEIA NQWNLDKRFE PELEEEKRNE 480
  481 LYKGWQKAVK AAMAFK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 174.0
Match: 2p3rA
Description: No description for 2p3rA was found.

Predicted functions:

Term Confidence Notes
glycerol kinase activity 5.25911418019759 bayes_pls_golite062009
carbohydrate kinase activity 2.33338276303563 bayes_pls_golite062009
hexokinase activity 1.70516840340504 bayes_pls_golite062009
binding 1.01811455363979 bayes_pls_golite062009
protein binding 0.973127052945726 bayes_pls_golite062009
glucokinase activity 0.47468456642723 bayes_pls_golite062009
kinase activity 0.345540463799773 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.324655711623803 bayes_pls_golite062009
glucose binding 0.31060748948812 bayes_pls_golite062009
catalytic activity 0.296484721581333 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.214617425075414 bayes_pls_golite062009
hydrolase activity 0.13181840194556 bayes_pls_golite062009
transferase activity 0.105619024604158 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle