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View Structure Prediction Details

Protein: gi|16123026, gi|...
Organism: Yersinia pestis CO92
Length: 212 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16123026, gi|....

Description E-value Query
Range
Subject
Range
gi|77960046, gi|... - gi|77960046|ref|ZP_00823945.1| COG0299: Folate-dependent phosphoribosylglycinamide formyltransferase...
1.0E-63 [1..212] [1..212]
gi|85694914, gi|... - gi|85711413|ref|ZP_01042472.1| Folate-dependent phosphoribosylglycinamide formyltransferase [Idiomar...
6.0E-63 [1..212] [1..212]
gi|88795665, gi|... - gi|88795665|ref|ZP_01111358.1| phosphoribosylglycinamide formyltransferase [Alteromonas macleodii 'D...
7.0E-63 [3..212] [7..216]
gi|77958968 - gi|77958968|ref|ZP_00822993.1| COG0299: Folate-dependent phosphoribosylglycinamide formyltransferase...
7.0E-63 [1..212] [2..213]
gi|77977642, gi|... - gi|77977642|ref|ZP_00833085.1| COG0299: Folate-dependent phosphoribosylglycinamide formyltransferase...
2.0E-62 [1..212] [1..212]
gi|51597112, gi|... - gi|51597112|ref|YP_071303.1| phosphoribosylglycinamide formyltransferase [Yersinia pseudotuberculosi...
Q668E4|Q668E4_YERPS - Putative phosphoribosylglycinamide formyltransferase - Yersinia pseudotuberculosis
6.0E-62 [1..212] [1..212]
gi|56460763, gi|... - gi|56460763|ref|YP_156044.1| phosphoribosylglycinamide formyltransferase [Idiomarina loihiensis L2TR...
1.0E-61 [1..212] [1..212]
gi|89080493, gi|... - gi|89095239|ref|ZP_01168161.1| phosphoribosylglycinamide formyltransferase [Oceanospirillum sp. MED9...
3.0E-61 [2..212] [3..213]
gi|37526651, gi|... - gi|37526651|ref|NP_929995.1| phosphoribosylglycinamide formyltransferase 1 (GART) (GAR transformylas...
5.0E-61 [1..212] [1..212]
gi|238788123, gi... - gi|77974627|ref|ZP_00830166.1| COG0299: Folate-dependent phosphoribosylglycinamide formyltransferase...
1.0E-60 [1..212] [1..212]

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Predicted Domain #1
Region A:
Residues: [1-212]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKIVVLISG QGSNLQALID AQQQGRISGK ISAVFSNNPA AYGLERAESA GIPHHALDAK  60
   61 AFTDRVSFDL ALAQAIDQYQ PDLLVLAGYM RILSPEFVKH YAGRMLNIHP SLLPKYPGLH 120
  121 THRQALENGD QEHGTSVHFV TEELDGGPVI LQAKVPIFSD DSEEDVAERV QTQEHSIYPL 180
  181 VVSWFTDGRL AMRDNAAWLD GVRLPLQGYA AE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.30103
Match: 1c2tA
Description: Glycinamide ribonucleotide transformylase, GART
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
methyltransferase activity 4.09881190860822 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 4.01667310557403 bayes_pls_golite062009
hydroxymethyl-, formyl- and related transferase activity 3.81159871979977 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 3.49010887242285 bayes_pls_golite062009
phosphoribosylglycinamide formyltransferase activity 2.94311083909314 bayes_pls_golite062009
methionyl-tRNA formyltransferase activity 2.39150724300118 bayes_pls_golite062009
catalytic activity 2.16003793103722 bayes_pls_golite062009
binding 1.1813924954238 bayes_pls_golite062009
transferase activity 1.01502594768782 bayes_pls_golite062009
ligase activity 0.922788719307786 bayes_pls_golite062009

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