| Protein: | gi|57753893, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 624 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|57753893, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
451.0 | [0..24] | [624..24] |
|
Region A: Residues: [1-228] |
1 11 21 31 41 51
| | | | | |
1 MAAHRWAVWA VLLLRLLVPA ARVLANMEGD ALHSLRTNLV DPNNVLQSWD PTLVNPCTWF 60
61 HVTCNNDNSV IRVDLGNAAL SGTLVPQLGQ LKNLQYLELY SNNISGTIPS ELGNLTNLVS 120
121 LDLYLNNFTG PIPDSLGNLL KLRFLRLNNN SLSGSIPKSL TAITALQVLD LSNNNLSGEV 180
181 PSTGSFSLFT PISFANNPSL CGPGTTKPCP GAPPFSPPPP YNPPTPVQ
|
| Detection Method: |  |
| Confidence: | 17.69897 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| signal transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| molecular transducer activity | 2.54176035045352 | bayes_pls_golite062009 |
| receptor activity | 2.44108148686445 | bayes_pls_golite062009 |
| transmembrane receptor activity | 2.25077658159974 | bayes_pls_golite062009 |
| binding | 1.87302803330255 | bayes_pls_golite062009 |
| protein kinase activity | 1.43632437878638 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 1.16530645523007 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.12585418084562 | bayes_pls_golite062009 |
| kinase activity | 1.11577341189523 | bayes_pls_golite062009 |
| G-protein coupled receptor activity | 1.04507575991279 | bayes_pls_golite062009 |
| protein binding | 0.646159692466759 | bayes_pls_golite062009 |
| transferase activity | 0.435331931559158 | bayes_pls_golite062009 |
| nucleic acid binding | 0.370391722473665 | bayes_pls_golite062009 |
| protein tyrosine kinase activity | 0.231213253402712 | bayes_pls_golite062009 |
| enzyme regulator activity | 0.154501444195573 | bayes_pls_golite062009 |
|
Region A: Residues: [229-284] |
1 11 21 31 41 51
| | | | | |
1 SPGSSSSTGA IAGGVAAGAA LLFAIPAIGF AWYRRRKPQE HFFDVPAEED PEVHLG
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [285-624] |
1 11 21 31 41 51
| | | | | |
1 QLKRFSLREL QVATDTFSNK NILGRGGFGK VYKGRLADGS LVAVKRLKEE RTPGGELQFQ 60
61 TEVEMISMAV HRNLLRLRGF CMTPTERLLV YPYMANGSVA SRLRERPPSE PPLDWRTRRR 120
121 IALGSARGLS YLHDHCDPKI IHRDVKAANI LLDEDFEAVV GDFGLAKLMD YKDTHVTTAV 180
181 RGTIGHIAPE YLSTGKSSEK TDVFGYGIML LELITGQRAF DLARLANDDD VMLLDWVKGL 240
241 LKEKRLEMLV DPDLQSNYID VEVESLIQVA LLCTQGSPTE RPKMAEVVRM LEGDGLAERW 300
301 EEWQKIEVVR QEVELGPHRN SEWIVDSTDN LHAVELSGPR
|
| Detection Method: | |
| Confidence: | 66.30103 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
